RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TRIM4Q9C037 500 aa17.19■□□□□ 0.34
RTN1-209ENST00000611068 MMADHCQ9H3L0 296 aaPredicted RBP17.19■□□□□ 0.34
RTN1-209ENST00000611068 NMRK2Q9NPI5 230 aa17.19■□□□□ 0.34
RTN1-209ENST00000611068 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
RTN1-209ENST00000611068 SLC12A6Q9UHW9 1150 aa17.19■□□□□ 0.34
RTN1-209ENST00000611068 WDR90Q96KV7 1748 aa17.19■□□□□ 0.34
RTN1-209ENST00000611068 A8MUI8 341 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 CNMDO75829 334 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 HOXD13P35453 343 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 GHRHRQ02643 423 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 CYFIP1Q7L576 1253 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 KCNV2Q8TDN2 545 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 ZFAND2BQ8WV99 257 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 AGTPBP1Q9UPW5 1226 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 LRRC10BA6NIK2 292 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 HMGB1P1B2RPK0 211 aaPredicted RBP17.18■□□□□ 0.34
RTN1-209ENST00000611068 ATP2A1O14983 1001 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 OATP04181 439 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 P4HBP07237 508 aaKnown RBP17.18■□□□□ 0.34
RTN1-209ENST00000611068 CUL3Q13618 768 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 IQCEQ6IPM2 695 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 GPAT2Q6NUI2 795 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 PADI6Q6TGC4 694 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 RAPGEF5Q92565 580 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 YIPF2Q9BWQ6 316 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 PTPRFP10586 1907 aa17.18■□□□□ 0.34
RTN1-209ENST00000611068 MACROD2A1Z1Q3 448 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 CELF2O95319 508 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 KCNJ2P63252 427 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 SPAG1Q07617 926 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 PPIL2Q13356 520 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 GKAP1Q5VSY0 366 aaPredicted RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 SWSAP1Q6NVH7 229 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 MAATS1Q7Z4T9 603 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 MB21D1Q8N884 522 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 PROCA1Q8NCQ7 364 aaPredicted RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 OCEL1Q9H607 264 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 DNAAF2Q9NVR5 837 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 MAP3K20Q9NYL2 800 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 GABBR1Q9UBS5 961 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 DOCK5Q9H7D0 1870 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 SOWAHBA6NEL2 793 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 CCT8L1PA6NM43 557 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 CXCL11O14625 94 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 HIP1RO75146 1068 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 YWHABP31946 246 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 IFT81Q8WYA0 676 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 TSG101Q99816 390 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 TBC1D22BQ9NU19 505 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 WDR35Q9P2L0 1181 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 CNOT8Q9UFF9 292 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 AGAP1Q9UPQ3 857 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 RASSF10A6NK89 507 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 GLI1P08151 1106 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 EEF1GP26641 437 aaKnown RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 CXCR5P32302 372 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 MIIPQ5JXC2 388 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 ODR4Q5SWX8 454 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 LRRC55Q6ZSA7 311 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 SYCP3Q8IZU3 236 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
RTN1-209ENST00000611068 PORCNQ9H237 461 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 SLC12A4Q9UP95 1085 aa17.17■□□□□ 0.34
RTN1-209ENST00000611068 LGALS16A8MUM7 142 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ALADP13716 330 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ADAM9Q13443 819 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ZNF268Q14587 947 aaPredicted RBP17.16■□□□□ 0.34
RTN1-209ENST00000611068 TAF11Q15544 211 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 FAM133BQ5BKY9 247 aaKnown RBP17.16■□□□□ 0.34
RTN1-209ENST00000611068 TMEM63BQ5T3F8 832 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ANO7Q6IWH7 933 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 CD302Q8IX05 232 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 OR2W6PQ8NHA6 318 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 INPP4AQ96PE3 977 aaPredicted RBP17.16■□□□□ 0.34
RTN1-209ENST00000611068 KCNH4Q9UQ05 1017 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 KCNA2P16389 499 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 NIPA1Q7RTP0 329 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 CPLX4Q7Z7G2 160 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 CCDC170Q8IYT3 715 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 SYT15Q9BQS2 421 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 KCTD10Q9H3F6 313 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ASB3Q9Y575 518 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 COL4A3BPQ9Y5P4 624 aa17.16■□□□□ 0.34
RTN1-209ENST00000611068 ITIH6Q6UXX5 1313 aa17.15■□□□□ 0.34
RTN1-209ENST00000611068 RBAK-RBAKDNI3L0D1 243 aa17.15■□□□□ 0.34
RTN1-209ENST00000611068 ATP6V1G1O75348 118 aa17.15■□□□□ 0.34
RTN1-209ENST00000611068 LUC7L3O95232 432 aaKnown RBP17.15■□□□□ 0.34
RTN1-209ENST00000611068 DRD4P21917 467 aa17.15■□□□□ 0.34
RTN1-209ENST00000611068 ALDH5A1P51649 535 aaPredicted RBP17.15■□□□□ 0.34
RTN1-209ENST00000611068 VAV2P52735 878 aa17.15■□□□□ 0.34
RTN1-209ENST00000611068 PAK2Q13177 524 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms