RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 KIAA1683Q9H0B3 1180 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 TUBD1Q9UJT1 453 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 FAM184BQ9ULE4 1060 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 PNMA8BQ9ULN7 279 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 NOB1Q9ULX3 412 aaKnown RBP5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 PMS2P1A4D2B8 440 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 MATN2O00339 956 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 ZRANB2O95218 330 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■□□□□ 11.2
SMCHD1-213ENST00000609587 CR2P20023 1033 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 SLC16A1P53985 500 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 ADKP55263 362 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 HGFACQ04756 655 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 CD69Q07108 199 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 MALLQ13021 153 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 LSM12Q3MHD2 195 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 MUM1L1Q5H9M0 696 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 FAM102BQ5T8I3 360 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 TAX1BP1Q86VP1 789 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 LDLRAD3Q86YD5 345 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 DNAJC10Q8IXB1 793 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 THEMISQ8N1K5 641 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 MYO1HQ8N1T3 1032 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 MIER2Q8N344 545 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 GLB1L3Q8NCI6 653 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 CFHR4Q92496 578 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 LPPQ93052 612 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 LRRC37BQ96QE4 947 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 UIMC1Q96RL1 719 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 ADI1Q9BV57 179 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 OAZ3Q9UMX2 235 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 DNM3Q9UQ16 869 aa5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 CTDP1Q9Y5B0 961 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-213ENST00000609587 LY86O95711 162 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 GAAP10253 952 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 CYP2C19P33261 490 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 ADAM15Q13444 863 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 UAP1L1Q3KQV9 507 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 CXorf57Q6NSI4 855 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 PCSK4Q6UW60 755 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 TPH2Q8IWU9 490 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 TCEAL8Q8IYN2 117 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 UNC5BQ8IZJ1 945 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 NEU4Q8WWR8 484 aaPredicted RBP5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 EDAQ92838 391 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 NUP88Q99567 741 aaPredicted RBP5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 GREM2Q9H772 168 aa5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 SAP30BPQ9UHR5 308 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-213ENST00000609587 A0A1W2PR48 441 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 PLSCR1O15162 318 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 C1SP09871 688 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 LTA4HP09960 611 aaKnown RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 U2AF1L5P0DN76 240 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 GSPT1P15170 499 aaKnown RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 U2AF1Q01081 240 aaKnown RBP eCLIP5.6□□□□□ -1.514e-6■■□□□ 12.7
SMCHD1-213ENST00000609587 MEF2AQ02078 507 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 TCIRG1Q13488 830 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 MLC1Q15049 377 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 NXNQ6DKJ4 435 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 FAM180AQ6UWF9 173 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 CLEC14AQ86T13 490 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 GIMAP8Q8ND71 665 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 PIK3C3Q8NEB9 887 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 RIN2Q8WYP3 895 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 GCDHQ92947 438 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 COA7Q96BR5 231 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 DMRT3Q9NQL9 472 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 SCOCQ9UIL1 159 aa5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 RBM8AQ9Y5S9 174 aaKnown RBP5.6□□□□□ -1.51
SMCHD1-213ENST00000609587 C2orf78A6NCI8 922 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 PRPF3O43395 683 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 PRAMEF4O60810 478 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 ATF3P18847 181 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 COMTP21964 271 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 AKAP5P24588 427 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 RPS19P39019 145 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 MCAMP43121 646 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 DUSP8Q13202 625 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 UBE3CQ15386 1083 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 RRP12Q5JTH9 1297 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 CCDC181Q5TID7 509 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 MAGEB6Q8N7X4 407 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 PLA2G15Q8NCC3 412 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 GPR156Q8NFN8 814 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 CACTINQ8WUQ7 758 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 VOPP1Q96AW1 172 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 CCDC136Q96JN2 1154 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 C8orf48Q96LL4 319 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 AGAP2Q99490 1192 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 DPYSL5Q9BPU6 564 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 SERPINB13Q9UIV8 391 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 SLC30A1Q9Y6M5 507 aa5.59□□□□□ -1.51
SMCHD1-213ENST00000609587 RPTORQ8N122 1335 aa5.58□□□□□ -1.52
SMCHD1-213ENST00000609587 GOLGA6CA6NDK9 693 aa5.58□□□□□ -1.52
SMCHD1-213ENST00000609587 GOLGA6BA6NDN3 693 aa5.58□□□□□ -1.52
SMCHD1-213ENST00000609587 AKR1B10O60218 316 aa5.58□□□□□ -1.52
SMCHD1-213ENST00000609587 CDC14BO60729 498 aa5.58□□□□□ -1.52
SMCHD1-213ENST00000609587 TMEM127O75204 238 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms