RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 ZFP42Q96MM3 310 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 ZNF396Q96N95 335 aaPredicted RBP15.77■□□□□ 0.12
PRDM16-210ENST00000607632 FIZ1Q96SL8 496 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 CDCA3Q99618 268 aaPredicted RBP15.77■□□□□ 0.12
PRDM16-210ENST00000607632 REEP2Q9BRK0 252 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
PRDM16-210ENST00000607632 USP20Q9Y2K6 914 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 IRAK3Q9Y616 596 aa15.77■□□□□ 0.12
PRDM16-210ENST00000607632 FSD2A1L4K1 749 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 CCDC169A6NNP5 214 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 SFI1A8K8P3 1242 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 NT5C1B-RDH14C9J2C7 533 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 POMCP01189 267 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 HSP90AA1P07900 732 aaKnown RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 MAPTP10636 758 aaKnown RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 AKAP5P24588 427 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 GTF2F1P35269 517 aaKnown RBP eCLIP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 SCNN1GP51170 649 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 KCNQ1P51787 676 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 CEBPZQ03701 1054 aaKnown RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 RNASELQ05823 741 aaKnown RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 GRIK3Q13003 919 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 DUSP6Q16828 381 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 SPECC1Q5M775 1068 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 TMEM169Q96HH4 297 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 VN1R3Q9BXE9 311 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 MRPL4Q9BYD3 311 aaKnown RBP15.76■□□□□ 0.11
PRDM16-210ENST00000607632 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 MARCH5Q9NX47 278 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 STK39Q9UEW8 545 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 MUC3AQ02505 3323 aa15.76■□□□□ 0.11
PRDM16-210ENST00000607632 NPHP3-ACAD11A0A0J9YXS1 232 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 H0YCG3 227 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 PTGESO14684 152 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 NRP1O14786 923 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 SPTLC2O15270 562 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 SLC16A4O15374 487 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 TBX10O75333 385 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 RECQL4O94761 1208 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 GLP2RO95838 553 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 KCNA5P22460 613 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 SMTNP53814 917 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 RAD51AP2Q09MP3 1159 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 STK38Q15208 465 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 NAB2Q15742 525 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 XKR4Q5GH76 650 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 ZPBP2Q6X784 338 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 TMEM184AQ6ZMB5 413 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 MSLNLQ96KJ4 702 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 TCF25Q9BQ70 676 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 CDT1Q9H211 546 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 SNTG2Q9NY99 539 aa15.75■□□□□ 0.11
PRDM16-210ENST00000607632 A0A087X0B3 334 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 LINC01565O15544 149 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 PIGRP01833 764 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 ALDH2P05091 517 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 CTSAP10619 480 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 TXLNAP40222 546 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 GRM5P41594 1212 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 NRIP1P48552 1158 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 DLX2Q07687 328 aaPredicted RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 PUS10Q3MIT2 529 aaKnown RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 MRPL43Q8N983 215 aaKnown RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 TARS2Q9BW92 718 aaKnown RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 APOL6Q9BWW8 343 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 ST6GALNAC4Q9H4F1 302 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 PARVGQ9HBI0 331 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 CLDND1Q9NY35 253 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 TFIP11Q9UBB9 837 aaKnown RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 FAN1Q9Y2M0 1017 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 TCF20Q9UGU0 1960 aaKnown RBP15.74■□□□□ 0.11
PRDM16-210ENST00000607632 NCOR1O75376 2440 aa15.74■□□□□ 0.11
PRDM16-210ENST00000607632 TRIP11Q15643 1979 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 GRXCR2A6NFK2 248 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 C2orf71A6NGG8 1288 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 HIDE1A8MVS5 230 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 LILRB3O75022 631 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 TOM1L1O75674 476 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 MCF2P10911 925 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 LIG1P18858 919 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 SMC1AQ14683 1233 aaKnown RBP15.73■□□□□ 0.11
PRDM16-210ENST00000607632 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
PRDM16-210ENST00000607632 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 PLPP4Q5VZY2 271 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 MPZL3Q6UWV2 235 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 CCDC73Q6ZRK6 1079 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 TMC7Q7Z402 723 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 HAUS6Q7Z4H7 955 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 APBB1IPQ7Z5R6 666 aaPredicted RBP15.73■□□□□ 0.11
PRDM16-210ENST00000607632 VPS52Q8N1B4 723 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 VN1R2Q8NFZ6 395 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 RASSF8Q8NHQ8 419 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 ADAMTS19Q8TE59 1207 aa15.73■□□□□ 0.11
PRDM16-210ENST00000607632 DNAJC19Q96DA6 116 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms