RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
CTSA-216ENST00000607212 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
CTSA-216ENST00000607212 XPNPEP1Q9NQW7 623 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 ANKEF1Q9NU02 776 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 MIOSQ9NXC5 875 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 DUSP12Q9UNI6 340 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 CLUHO75153 1309 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 A0A087WWV3 80 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 LILRB3O75022 631 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 TADA2AO75478 443 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 RFPL2O75678 378 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 NEFLP07196 543 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 CFHP08603 1231 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
CTSA-216ENST00000607212 SPIRE1Q08AE8 756 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 FUT10Q6P4F1 479 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 ZBTB8OSQ8IWT0 167 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 RIN2Q8WYP3 895 aaPredicted RBP16.49■□□□□ 0.23
CTSA-216ENST00000607212 B3GALT6Q96L58 329 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 IGSF9Q9P2J2 1179 aa16.49■□□□□ 0.23
CTSA-216ENST00000607212 MTCL1Q9Y4B5 1905 aaKnown RBP16.49■□□□□ 0.23
CTSA-216ENST00000607212 F8W810 466 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 B4GALT5O43286 388 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 GLRA2P23416 452 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 DSG1Q02413 1049 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 GRIK3Q13003 919 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 USP41Q3LFD5 358 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 SLC27A1Q6PCB7 646 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 GET4Q7L5D6 327 aaPredicted RBP16.48■□□□□ 0.23
CTSA-216ENST00000607212 FRMD5Q7Z6J6 570 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 CMASQ8NFW8 434 aaPredicted RBP16.48■□□□□ 0.23
CTSA-216ENST00000607212 WDR6Q9NNW5 1121 aaKnown RBP16.48■□□□□ 0.23
CTSA-216ENST00000607212 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
CTSA-216ENST00000607212 CA14Q9ULX7 337 aa16.48■□□□□ 0.23
CTSA-216ENST00000607212 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
CTSA-216ENST00000607212 RPL17P18621 184 aaKnown RBP16.47■□□□□ 0.23
CTSA-216ENST00000607212 ARL2P36404 184 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 CREMQ03060 361 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 DSC1Q08554 894 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 KIAA0319Q5VV43 1072 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 CWF19L1Q69YN2 538 aaKnown RBP16.47■□□□□ 0.23
CTSA-216ENST00000607212 ASCL5Q7RTU5 278 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 CEP57Q86XR8 500 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 DIS3L2Q8IYB7 885 aaKnown RBP16.47■□□□□ 0.23
CTSA-216ENST00000607212 HASPINQ8TF76 798 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 RSAD2Q8WXG1 361 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 NKD2Q969F2 451 aaPredicted RBP16.47■□□□□ 0.23
CTSA-216ENST00000607212 RTP3Q9BQQ7 232 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 RXFP1Q9HBX9 757 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 ADAM28Q9UKQ2 775 aa16.47■□□□□ 0.23
CTSA-216ENST00000607212 POTEMA6NI47 508 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 BTBD18B2RXH4 712 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 TGM5O43548 720 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 LYPLA2O95372 231 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 AOC1P19801 751 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 MCM7P33993 719 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 RARRES1P49788 294 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 POU5F1BQ06416 359 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 SAFBQ15424 915 aaKnown RBP eCLIP16.46■□□□□ 0.23
CTSA-216ENST00000607212 CYP26C1Q6V0L0 522 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 IFNLR1Q8IU57 520 aaPredicted RBP16.46■□□□□ 0.23
CTSA-216ENST00000607212 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 GPR62Q9BZJ7 368 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 PLEKHA4Q9H4M7 779 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 GPRC5CQ9NQ84 441 aa16.46■□□□□ 0.23
CTSA-216ENST00000607212 PRMT7Q9NVM4 692 aaPredicted RBP16.46■□□□□ 0.23
CTSA-216ENST00000607212 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTSA-216ENST00000607212 PRR23AA6NEV1 266 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 CASTOR2A6NHX0 329 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 PI15O43692 258 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
CTSA-216ENST00000607212 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
CTSA-216ENST00000607212 NBL1P41271 181 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 HSP90AA2PQ14568 343 aaPredicted RBP16.45■□□□□ 0.22
CTSA-216ENST00000607212 AMHR2Q16671 573 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 ME3Q16798 604 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 LIN9Q5TKA1 542 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 PRSS55Q6UWB4 352 aaPredicted RBP16.45■□□□□ 0.22
CTSA-216ENST00000607212 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 GTF3C6Q969F1 213 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 MYADMQ96S97 322 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 ADPGKQ9BRR6 497 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 NT5C3AQ9H0P0 336 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 CACNG4Q9UBN1 327 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 POLIQ9UNA4 740 aa16.45■□□□□ 0.22
CTSA-216ENST00000607212 ARHGEF35A5YM69 484 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 PROB1E7EW31 1015 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 N4BP3O15049 544 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
CTSA-216ENST00000607212 LARGE1O95461 756 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 ANAPC15P60006 121 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 ANGPT1Q15389 498 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 FAM171A1Q5VUB5 890 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 CCDC105Q8IYK2 499 aa16.44■□□□□ 0.22
CTSA-216ENST00000607212 RNF168Q8IYW5 571 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms