RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 RTN4RL1Q86UN2 441 aaPredicted RBP8.4□□□□□ -1.06
MSH6-211ENST00000606499 TMEM192Q8IY95 271 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 NOC3LQ8WTT2 800 aaKnown RBP8.4□□□□□ -1.06
MSH6-211ENST00000606499 POMGNT1Q8WZA1 660 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 APBB2Q92870 758 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 SAAL1Q96ER3 474 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 CCDC51Q96ER9 411 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 DHTKD1Q96HY7 919 aaPredicted RBP8.4□□□□□ -1.06
MSH6-211ENST00000606499 LBHD1Q9BQE6 289 aaPredicted RBP8.4□□□□□ -1.06
MSH6-211ENST00000606499 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSH6-211ENST00000606499 TCHPQ9BT92 498 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 MSTO1Q9BUK6 570 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 NXF3Q9H4D5 531 aaKnown RBP8.4□□□□□ -1.06
MSH6-211ENST00000606499 DACH1Q9UI36 760 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 HES2Q9Y543 173 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 KIAA1671Q9BY89 1806 aa8.4□□□□□ -1.07
MSH6-211ENST00000606499 CITO14578 2027 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 GOLGA8IPA6NC78 632 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 GOLGA8JA6NMD2 632 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 MEIS3P2A8K0S8 358 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 C9IYK1 514 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 H0YGN5 161 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 CALUO43852 315 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 NR3C1P04150 777 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 PFKMP08237 780 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 MCF2P10911 925 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 ZSCAN20P17040 1043 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 ATF7P17544 494 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 GARTP22102 1010 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 NR2F2P24468 414 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 TNFSF9P41273 254 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 ACOT2P49753 483 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 OSTNP61366 133 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 LRRC63Q05C16 580 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 IKBKEQ14164 716 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 DCAF4L1Q3SXM0 396 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.39□□□□□ -1.07
MSH6-211ENST00000606499 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 OTOP2Q7RTS6 562 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 TMCO2Q7Z6W1 182 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 THNSL1Q8IYQ7 743 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 AOPEPQ8N6M6 819 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 RNF169Q8NCN4 708 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 SMG8Q8ND04 991 aaKnown RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 GOLGA5Q8TBA6 731 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 LPPQ93052 612 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 ADPGKQ9BRR6 497 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 FAM213AQ9BRX8 229 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 APOL6Q9BWW8 343 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 FTHL17Q9BXU8 183 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 TRIM6Q9C030 488 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 CHST12Q9NRB3 414 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 RGS18Q9NS28 235 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 FAM105AQ9NUU6 356 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 HSPBP1Q9NZL4 362 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 RWDD2AQ9UIY3 292 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 AGO2Q9UKV8 859 aaKnown RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 TRAF3IP3Q9Y228 551 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 IPPQ9Y573 584 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 PCDHB2Q9Y5E7 798 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 STYXL1Q9Y6J8 313 aa8.39□□□□□ -1.07
MSH6-211ENST00000606499 TDRD15B5MCY1 1934 aaKnown RBP8.39□□□□□ -1.07
MSH6-211ENST00000606499 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 REV3LO60673 3130 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 A0A0U1RQF3 1178 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 BICDL2A1A5D9 508 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ZBBXA8MT70 800 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ENPP3O14638 875 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 OGTO15294 1046 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 MEFVO15553 781 aaPredicted RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 FGBP02675 491 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ACTN1P12814 892 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 AKAP5P24588 427 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ERCC5P28715 1186 aaPredicted RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 GRM5P41594 1212 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 CASP4P49662 377 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ZNF445P59923 1031 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 WDR5P61964 334 aaKnown RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 DEFB103AP81534 67 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 EDRF1Q3B7T1 1238 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 TMEM240Q5SV17 173 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 SLFN12LQ6IEE8 588 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 PSRC1Q6PGN9 363 aaPredicted RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 CRELD2Q6UXH1 353 aaPredicted RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 LRRC55Q6ZSA7 311 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 SLC24A5Q71RS6 500 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ECHDC2Q86YB7 292 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 CBWD2Q8IUF1 395 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 C12orf56Q8IXR9 622 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 ZC3H3Q8IXZ2 948 aaKnown RBP8.38□□□□□ -1.07
MSH6-211ENST00000606499 XXYLT1Q8NBI6 393 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 TSG101Q99816 390 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 TRAIPQ9BWF2 469 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 CXCL16Q9H2A7 254 aa8.38□□□□□ -1.07
MSH6-211ENST00000606499 TSPY26PQ9H489 355 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms