RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 FBXO2Q9UK22 296 aaPredicted RBP24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 FAM50BQ9Y247 325 aa24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 SRPRBQ9Y5M8 271 aaKnown RBP24.09■■□□□ 1.45
PPFIA3-208ENST00000602726 HIDE1A8MVS5 230 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 TNFRSF10AO00220 468 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 TBX10O75333 385 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 PLS3P13797 630 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 DHX8Q14562 1220 aaKnown RBP24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 CLUL1Q15846 466 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 DCAF4L1Q3SXM0 396 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 EEF1DP3Q658K8 133 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 APBB1IPQ7Z5R6 666 aaPredicted RBP24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 DDX53Q86TM3 631 aaKnown RBP24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 BCL7CQ8WUZ0 217 aaPredicted RBP24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 USP28Q96RU2 1077 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 RPS6KC1Q96S38 1066 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 CCSER1Q9C0I3 900 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 MIOSQ9NXC5 875 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 ARHGAP28Q9P2N2 729 aa24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 DAXXQ9UER7 740 aaPredicted RBP24.08■■□□□ 1.45
PPFIA3-208ENST00000602726 ZMYM2Q9UBW7 1377 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 NPHP3-ACAD11A0A0J9YXS1 232 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 GRXCR2A6NFK2 248 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 NRP1O14786 923 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 SLC16A4O15374 487 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 NR1I2O75469 434 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 CXCL14O95715 111 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 PDIA4P13667 645 aaKnown RBP24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 OR1G1P47890 313 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 SMTNP53814 917 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 ARSHQ5FYA8 562 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 SPECC1Q5M775 1068 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 GPBP1Q86WP2 473 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 COLGALT2Q8IYK4 626 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 MRPL43Q8N983 215 aaKnown RBP24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 SPIRE2Q8WWL2 714 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 EPSTI1Q96J88 318 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 NTPCRQ9BSD7 190 aaKnown RBP24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 MRPL4Q9BYD3 311 aaKnown RBP24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 SNTG2Q9NY99 539 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 STK39Q9UEW8 545 aa24.07■■□□□ 1.44
PPFIA3-208ENST00000602726 IL9P15248 144 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 CACNB1Q02641 598 aaPredicted RBP24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 MCM6Q14566 821 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 SLC39A14Q15043 492 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 TMEM87AQ8NBN3 555 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 RAD54LQ92698 747 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 CLIC6Q96NY7 704 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 BLOC1S4Q9NUP1 217 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 CCDC39Q9UFE4 941 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 CD207Q9UJ71 328 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 TNFSF13BQ9Y275 285 aa24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 PRG3Q9Y2Y8 225 aaPredicted RBP24.06■■□□□ 1.44
PPFIA3-208ENST00000602726 MYH11P35749 1972 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 C2orf71A6NGG8 1288 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 GLP2RO95838 553 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 KRT18P05783 430 aaKnown RBP24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 SRGAP2BP0DMP2 458 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 TXLNAP40222 546 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 DSC1Q08554 894 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 GRIK3Q13003 919 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 FOXD4L5Q5VV16 416 aaPredicted RBP24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 USP49Q70CQ1 688 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 SPRYD3Q8NCJ5 442 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 GSTCDQ8NEC7 633 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 LRRC15Q8TF66 581 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 FOXD4L4Q8WXT5 416 aaPredicted RBP24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 ZNF396Q96N95 335 aaPredicted RBP24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 ACO2Q99798 780 aaKnown RBP24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 ZBP1Q9H171 429 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 CLEC1BQ9P126 229 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 LARSQ9P2J5 1176 aaKnown RBP24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 ODF2LQ9ULJ1 636 aa24.05■■□□□ 1.44
PPFIA3-208ENST00000602726 TDRD15B5MCY1 1934 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 RECQL4O94761 1208 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 CTSAP10619 480 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 STRN3Q13033 797 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 STK38Q15208 465 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 TAS1R3Q7RTX0 852 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 KRI1Q8N9T8 703 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 LARP4BQ92615 738 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 MSLNLQ96KJ4 702 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 REEP2Q9BRK0 252 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 TARS2Q9BW92 718 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 BARX2Q9UMQ3 279 aaPredicted RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 GDAQ9Y2T3 454 aa24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 MORC2Q9Y6X9 1032 aaPredicted RBP24.04■■□□□ 1.44
PPFIA3-208ENST00000602726 DDIT3P35638 169 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 NASPP49321 788 aaPredicted RBP24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 SMAD4Q13485 552 aaKnown RBP24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 GIT2Q14161 759 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 ZNF568Q3ZCX4 644 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 LLGL2Q6P1M3 1020 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 TMEM161BQ8NDZ6 487 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 AUTS2Q8WXX7 1259 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 TCHPQ9BT92 498 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 COLEC11Q9BWP8 271 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 VN1R3Q9BXE9 311 aa24.03■■□□□ 1.44
PPFIA3-208ENST00000602726 H0YCG3 227 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms