RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 RARRES1P49788 294 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 MBTD1Q05BQ5 628 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 NR5A1Q13285 461 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 FRMD5Q7Z6J6 570 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 MCPH1Q8NEM0 835 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 FLCNQ8NFG4 579 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 MTMR9Q96QG7 549 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 RTP3Q9BQQ7 232 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 EIF2AQ9BY44 585 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 KCNK12Q9HB15 430 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 GJB4Q9NTQ9 266 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 PRMT7Q9NVM4 692 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 MARCH5Q9NX47 278 aa19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 PRG3Q9Y2Y8 225 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-227ENST00000602011 FAM186AA6NE01 2351 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 CCDC195A0A1B0GUA6 201 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 ARF4P18085 180 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 MLH1P40692 756 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 GRIK3Q13003 919 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 CAPSQ13938 189 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 AMHR2Q16671 573 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 EARS2Q5JPH6 523 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 GTF3C6Q969F1 213 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 RNF39Q9H2S5 420 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 TUFT1Q9NNX1 390 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 MAN1C1Q9NR34 630 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 BMP2KQ9NSY1 1161 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 ZDHHC7Q9NXF8 308 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.76■□□□□ 0.751e-8■■■■■ 45.1
SHKBP1-227ENST00000602011 WNT16Q9UBV4 365 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 DUSP12Q9UNI6 340 aa19.76■□□□□ 0.75
SHKBP1-227ENST00000602011 C2CD2LO14523 706 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 PI15O43692 258 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 GLRA2P23416 452 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 TXKP42681 527 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 SCNN1GP51170 649 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 ORC2Q13416 577 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 SAFBQ15424 915 aaKnown RBP eCLIP19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 FAM187BQ17R55 369 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 CWF19L1Q69YN2 538 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 ZBTB8OSQ8IWT0 167 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 C2orf40Q9H1Z8 148 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 EPS15L1Q9UBC2 864 aa19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 ZFP37Q9Y6Q3 630 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-227ENST00000602011 BTBD18B2RXH4 712 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 MYBP10242 640 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 MUTP22033 750 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 NBL1P41271 181 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 PDXDC1Q6P996 788 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 TAS1R1Q7RTX1 841 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 DIS3L2Q8IYB7 885 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 ERMNQ8TAM6 284 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 ASAP3Q8TDY4 903 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 CPB2Q96IY4 423 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 ZFP42Q96MM3 310 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 MIOSQ9NXC5 875 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 ADAM28Q9UKQ2 775 aa19.74■□□□□ 0.75
SHKBP1-227ENST00000602011 DENND4AQ7Z401 1863 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 TADA2AO75478 443 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 NEFLP07196 543 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 AOC1P19801 751 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 ELAVL2Q12926 359 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 ME3Q16798 604 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 FUT10Q6P4F1 479 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 GSTCDQ8NEC7 633 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 POLR3CQ9BUI4 534 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 FZD8Q9H461 694 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 FBXL21Q9UKT6 434 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 HES2Q9Y543 173 aa19.73■□□□□ 0.75
SHKBP1-227ENST00000602011 N4BP3O15049 544 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 NPR3P17342 541 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 ATP2B1P20020 1258 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 LILRA6Q6PI73 481 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 RTL10Q7L3V2 364 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 NSUN7Q8NE18 718 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 PIGOQ8TEQ8 1089 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 SMG7Q92540 1137 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 PRKD2Q9BZL6 878 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 NT5C3AQ9H0P0 336 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 POLR3FQ9H1D9 316 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 PIDD1Q9HB75 910 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 PARP2Q9UGN5 583 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 STK24Q9Y6E0 443 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 CLUHO75153 1309 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 SF3B1O75533 1304 aaKnown RBP eCLIP19.72■□□□□ 0.756e-8■■■■■ 80.2
SHKBP1-227ENST00000602011 C2orf16Q68DN1 1984 aa19.72■□□□□ 0.75
SHKBP1-227ENST00000602011 FAM205CA6NFA0 338 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 LRRIQ4A6NIV6 560 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 NARSO43776 548 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 NPTXRO95502 500 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 GBP2P32456 591 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 TUSC3Q13454 348 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 PPP2R5AQ15172 486 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 CDCA2Q69YH5 1023 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 NECAB1Q8N987 351 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 ADPGKQ9BRR6 497 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 APOL6Q9BWW8 343 aa19.71■□□□□ 0.75
SHKBP1-227ENST00000602011 NXF3Q9H4D5 531 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms