RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 APBB1IPQ7Z5R6 666 aaPredicted RBP18.92■□□□□ 0.62
HERC3-214ENST00000601319 DDX53Q86TM3 631 aaKnown RBP18.92■□□□□ 0.62
HERC3-214ENST00000601319 COLGALT2Q8IYK4 626 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 GSTCDQ8NEC7 633 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.92■□□□□ 0.62
HERC3-214ENST00000601319 LRRC15Q8TF66 581 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
HERC3-214ENST00000601319 RAD54LQ92698 747 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 FAM193BQ96PV7 902 aaPredicted RBP18.92■□□□□ 0.62
HERC3-214ENST00000601319 APOL6Q9BWW8 343 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 GBP3Q9H0R5 595 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 ZBP1Q9H171 429 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 TLE6Q9H808 572 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 TNFSF13BQ9Y275 285 aa18.92■□□□□ 0.62
HERC3-214ENST00000601319 H3BQ06 376 aaPredicted RBP18.91■□□□□ 0.62
HERC3-214ENST00000601319 LINC01565O15544 149 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 GLP2RO95838 553 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 SCP2P22307 547 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
HERC3-214ENST00000601319 SCNN1GP51170 649 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 NT5DC1Q5TFE4 455 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 ATF7IP2Q5U623 682 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 PLPP4Q5VZY2 271 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 EEF1DP3Q658K8 133 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 PTCRAQ6ISU1 281 aaPredicted RBP18.91■□□□□ 0.62
HERC3-214ENST00000601319 TAS1R3Q7RTX0 852 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 TMC7Q7Z402 723 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 RASSF8Q8NHQ8 419 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 MSLNLQ96KJ4 702 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
HERC3-214ENST00000601319 IGFLR1Q9H665 355 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 LARSQ9P2J5 1176 aaKnown RBP18.91■□□□□ 0.62
HERC3-214ENST00000601319 STK17AQ9UEE5 414 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 FAM50BQ9Y247 325 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 IRAK3Q9Y616 596 aa18.91■□□□□ 0.62
HERC3-214ENST00000601319 GRXCR2A6NFK2 248 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 ALDH2P05091 517 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 LIG1P18858 919 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 AKAP5P24588 427 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 TXLNAP40222 546 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 ZNF131P52739 623 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 SMTNP53814 917 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 DLX2Q07687 328 aaPredicted RBP18.9■□□□□ 0.62
HERC3-214ENST00000601319 KCNC3Q14003 757 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 GIT2Q14161 759 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 BMS1Q14692 1282 aaKnown RBP18.9■□□□□ 0.62
HERC3-214ENST00000601319 GPBP1Q86WP2 473 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 MRPL43Q8N983 215 aaKnown RBP18.9■□□□□ 0.62
HERC3-214ENST00000601319 KRI1Q8N9T8 703 aaKnown RBP18.9■□□□□ 0.62
HERC3-214ENST00000601319 TMEM161BQ8NDZ6 487 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 LARP4BQ92615 738 aaKnown RBP18.9■□□□□ 0.62
HERC3-214ENST00000601319 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 REEP2Q9BRK0 252 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 VN1R3Q9BXE9 311 aa18.9■□□□□ 0.62
HERC3-214ENST00000601319 PLXNA3P51805 1871 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 C2orf71A6NGG8 1288 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 HIDE1A8MVS5 230 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 H0YCG3 227 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 TNFRSF10AO00220 468 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 NRP1O14786 923 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 SLC16A4O15374 487 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 RECQL4O94761 1208 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 BRD1O95696 1058 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 EFEMP2O95967 443 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 CTSAP10619 480 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 MAPTP10636 758 aaKnown RBP18.89■□□□□ 0.61
HERC3-214ENST00000601319 NDUFV1P49821 464 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 NCKAP1LP55160 1127 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.61
HERC3-214ENST00000601319 RAD51AP2Q09MP3 1159 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 COASYQ13057 564 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 SMAD4Q13485 552 aaKnown RBP18.89■□□□□ 0.61
HERC3-214ENST00000601319 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 EP400NLQ6ZTU2 488 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 USP49Q70CQ1 688 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 RBM23Q86U06 439 aaKnown RBP18.89■□□□□ 0.61
HERC3-214ENST00000601319 VPS52Q8N1B4 723 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 ZNF396Q96N95 335 aaPredicted RBP18.89■□□□□ 0.61
HERC3-214ENST00000601319 RPS6KC1Q96S38 1066 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 ACO2Q99798 780 aaKnown RBP18.89■□□□□ 0.61
HERC3-214ENST00000601319 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 MARCH5Q9NX47 278 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 MIOSQ9NXC5 875 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 CLEC1BQ9P126 229 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 PARP2Q9UGN5 583 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 USP20Q9Y2K6 914 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 FAN1Q9Y2M0 1017 aa18.89■□□□□ 0.61
HERC3-214ENST00000601319 SFI1A8K8P3 1242 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 NR1I2O75469 434 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 YEATS4O95619 227 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 SRGAP2BP0DMP2 458 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 ZSCAN22P10073 491 aaPredicted RBP18.88■□□□□ 0.61
HERC3-214ENST00000601319 PROZP22891 400 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 MCM6Q14566 821 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 RNF168Q8IYW5 571 aaPredicted RBP18.88■□□□□ 0.61
HERC3-214ENST00000601319 LINC00301Q8NCQ3 95 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 VN1R2Q8NFZ6 395 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 CDT1Q9H211 546 aa18.88■□□□□ 0.61
HERC3-214ENST00000601319 CD207Q9UJ71 328 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms