RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ZBTB33Q86T24 672 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 ERGIC2Q96RQ1 377 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 HAPLN2Q9GZV7 340 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 CDHR5Q9HBB8 845 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 PTPRHQ9HD43 1115 aa24.59■■□□□ 1.53
IRF3-228ENST00000601291 TRMT13Q9NUP7 481 aaKnown RBP24.59■■□□□ 1.53
IRF3-228ENST00000601291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.59■■□□□ 1.533e-7■■■□□ 15.9
IRF3-228ENST00000601291 ADRB2P07550 413 aa24.58■■□□□ 1.52
IRF3-228ENST00000601291 ARF4P18085 180 aaPredicted RBP24.58■■□□□ 1.52
IRF3-228ENST00000601291 ENPEPQ07075 957 aa24.58■■□□□ 1.52
IRF3-228ENST00000601291 APBB1IPQ7Z5R6 666 aaPredicted RBP24.58■■□□□ 1.52
IRF3-228ENST00000601291 TRIM44Q96DX7 344 aaPredicted RBP24.58■■□□□ 1.52
IRF3-228ENST00000601291 CDY2AQ9Y6F7 541 aa24.58■■□□□ 1.52
IRF3-228ENST00000601291 TRIP12Q14669 1992 aaPredicted RBP24.57■■□□□ 1.52
IRF3-228ENST00000601291 ABLIM1O14639 778 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 OGTO15294 1046 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 THPOP40225 353 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 CYP24A1Q07973 514 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 U2AF1L4Q8WU68 220 aaKnown RBP24.57■■□□□ 1.52
IRF3-228ENST00000601291 MFSD14AQ96MC6 490 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 PCMTD1Q96MG8 357 aaPredicted RBP24.57■■□□□ 1.52
IRF3-228ENST00000601291 ADPGKQ9BRR6 497 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 CRISPLD2Q9H0B8 497 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 PDZD7Q9H5P4 517 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 CEP350Q5VT06 3117 aa24.57■■□□□ 1.52
IRF3-228ENST00000601291 STX10O60499 249 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 CAND2O75155 1236 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 SGPL1O95470 568 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 MCF2P10911 925 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 FGFR4P22455 802 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 AXLP30530 894 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 ACOT2P49753 483 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 GSDMDP57764 484 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 TRIM14Q14142 442 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 SYCP1Q15431 976 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 TMC2Q8TDI7 906 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 WNT8BQ93098 351 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 CPB2Q96IY4 423 aa24.56■■□□□ 1.52
IRF3-228ENST00000601291 TFRCP02786 760 aaKnown RBP24.55■■□□□ 1.52
IRF3-228ENST00000601291 TPM1P09493 284 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 CTSHP09668 335 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 TRIM49P0CI25 452 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 TRIM49CP0CI26 452 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 EEF1DP3Q658K8 133 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 PPFIBP1Q86W92 1011 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 TMEM40Q8WWA1 233 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 SENP6Q9GZR1 1112 aaPredicted RBP24.55■■□□□ 1.52
IRF3-228ENST00000601291 CDT1Q9H211 546 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 RBAKQ9NYW8 714 aaPredicted RBP24.55■■□□□ 1.52
IRF3-228ENST00000601291 CENPFP49454 3210 aa24.55■■□□□ 1.52
IRF3-228ENST00000601291 A0A1B0GUA9 196 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 N4BP1O75113 896 aaKnown RBP24.54■■□□□ 1.52
IRF3-228ENST00000601291 MCCD1P59942 119 aaPredicted RBP24.54■■□□□ 1.52
IRF3-228ENST00000601291 KYAT1Q16773 422 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 NOTUMQ6P988 496 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 CCDC186Q7Z3E2 898 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 CDR2LQ86X02 465 aaPredicted RBP24.54■■□□□ 1.52
IRF3-228ENST00000601291 CCDC127Q96BQ5 260 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 B4GALT4O60513 344 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 FMO5P49326 533 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 MGAT3Q09327 533 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 PSMD6Q15008 389 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 DCAF4L1Q3SXM0 396 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 CRELD2Q6UXH1 353 aaPredicted RBP24.54■■□□□ 1.52
IRF3-228ENST00000601291 PARD3BQ8TEW8 1205 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 IQCDQ96DY2 449 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 FNBP1Q96RU3 617 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 NUP58Q9BVL2 599 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 AGPAT5Q9NUQ2 364 aa24.54■■□□□ 1.52
IRF3-228ENST00000601291 GTPBP10A4D1E9 387 aaKnown RBP24.53■■□□□ 1.52
IRF3-228ENST00000601291 TULP1O00294 542 aaPredicted RBP24.53■■□□□ 1.52
IRF3-228ENST00000601291 FAM189A1O60320 539 aa24.53■■□□□ 1.52
IRF3-228ENST00000601291 DLG4P78352 724 aa24.53■■□□□ 1.52
IRF3-228ENST00000601291 TBX2Q13207 712 aaPredicted RBP24.53■■□□□ 1.52
IRF3-228ENST00000601291 SLC27A1Q6PCB7 646 aa24.53■■□□□ 1.52
IRF3-228ENST00000601291 CCDC155Q8N6L0 562 aa24.53■■□□□ 1.52
IRF3-228ENST00000601291 DHX38Q92620 1227 aaKnown RBP24.53■■□□□ 1.52
IRF3-228ENST00000601291 TRPV6Q9H1D0 765 aa24.53■■□□□ 1.52
IRF3-228ENST00000601291 MMRN2Q9H8L6 949 aa24.53■■□□□ 1.52
IRF3-228ENST00000601291 CHRNA1P02708 482 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 TRIM21P19474 475 aaKnown RBP24.52■■□□□ 1.52
IRF3-228ENST00000601291 MYL7Q01449 175 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 CETN1Q12798 172 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 ZBTB41Q5SVQ8 909 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 GBP6Q6ZN66 633 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 BRSK2Q8IWQ3 736 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 THNSL1Q8IYQ7 743 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 CCDC150Q8NCX0 1101 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 PLEKHO2Q8TD55 490 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 CPSF3Q9UKF6 684 aaKnown RBP24.52■■□□□ 1.52
IRF3-228ENST00000601291 PIN4Q9Y237 131 aaKnown RBP24.52■■□□□ 1.52
IRF3-228ENST00000601291 SIK3Q9Y2K2 1263 aa24.52■■□□□ 1.52
IRF3-228ENST00000601291 MROH7Q68CQ1 1323 aa24.51■■□□□ 1.51
IRF3-228ENST00000601291 LRRIQ3A6PVS8 624 aaPredicted RBP24.51■■□□□ 1.51
IRF3-228ENST00000601291 P4HA2O15460 535 aa24.51■■□□□ 1.51
IRF3-228ENST00000601291 RPS6KA5O75582 802 aa24.51■■□□□ 1.51
IRF3-228ENST00000601291 DLATP10515 647 aaKnown RBP24.51■■□□□ 1.51
IRF3-228ENST00000601291 HOXA11P31270 313 aaPredicted RBP24.51■■□□□ 1.51
IRF3-228ENST00000601291 CDK7P50613 346 aa24.51■■□□□ 1.51
IRF3-228ENST00000601291 TRIM71Q2Q1W2 868 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms