RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SLC9A9Q8IVB4 645 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 DHX40Q8IX18 779 aaKnown RBP22.34■■□□□ 1.17
PNKP-215ENST00000600910 ZSWIM2Q8NEG5 633 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 TET1Q8NFU7 2136 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 TMEM174Q8WUU8 243 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 APBB2Q92870 758 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 VWCEQ96DN2 955 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 SAAL1Q96ER3 474 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 DMAC2Q9NW81 257 aa22.34■■□□□ 1.17
PNKP-215ENST00000600910 AGO2Q9UKV8 859 aaKnown RBP22.34■■□□□ 1.17
PNKP-215ENST00000600910 MCF2P10911 925 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 MYBPC2Q14324 1141 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 IQCB1Q15051 598 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 TCTN1Q2MV58 587 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 DCAF4L1Q3SXM0 396 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 UBXN11Q5T124 520 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 LRRC55Q6ZSA7 311 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 GAS2L3Q86XJ1 694 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 ZC3H3Q8IXZ2 948 aaKnown RBP22.33■■□□□ 1.17
PNKP-215ENST00000600910 BADQ92934 168 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 ADAM2Q99965 735 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 SRRTQ9BXP5 876 aaKnown RBP22.33■■□□□ 1.17
PNKP-215ENST00000600910 FTHL17Q9BXU8 183 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 ZMYND8Q9ULU4 1186 aaPredicted RBP22.33■■□□□ 1.17
PNKP-215ENST00000600910 NFE2L3Q9Y4A8 694 aa22.33■■□□□ 1.17
PNKP-215ENST00000600910 IKBKBO14920 756 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 CETN3O15182 167 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 EXOC3O60645 756 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 NCAPHQ15003 741 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 LUZP1Q86V48 1076 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 XXYLT1Q8NBI6 393 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 NOC3LQ8WTT2 800 aaKnown RBP22.32■■□□□ 1.16
PNKP-215ENST00000600910 TRIM6Q9C030 488 aaPredicted RBP22.32■■□□□ 1.16
PNKP-215ENST00000600910 LTBP2Q14767 1821 aa22.32■■□□□ 1.16
PNKP-215ENST00000600910 GOLGA8IPA6NC78 632 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 GOLGA8JA6NMD2 632 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 BECN2A8MW95 431 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 KIAA0391O15091 583 aaKnown RBP22.31■■□□□ 1.16
PNKP-215ENST00000600910 OGTO15294 1046 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 FAM189A1O60320 539 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 CASP4P49662 377 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 SEZ6Q53EL9 994 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 CEP135Q66GS9 1140 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 APBB1IPQ7Z5R6 666 aaPredicted RBP22.31■■□□□ 1.16
PNKP-215ENST00000600910 THNSL1Q8IYQ7 743 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 GPD1LQ8N335 351 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 CEP120Q8N960 986 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 RNF214Q8ND24 703 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 FAM213AQ9BRX8 229 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 SMTNL1A8MU46 457 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 ACOT2P49753 483 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 OSTNP61366 133 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 ZBTB41Q5SVQ8 909 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 CNKSR3Q6P9H4 555 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 RTN4RL1Q86UN2 441 aaPredicted RBP22.31■■□□□ 1.16
PNKP-215ENST00000600910 RPUSD2Q8IZ73 545 aaKnown RBP22.31■■□□□ 1.16
PNKP-215ENST00000600910 RDH13Q8NBN7 331 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 LINC01599Q8WXQ3 324 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 CEP63Q96MT8 703 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 RGS18Q9NS28 235 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 FAM105AQ9NUU6 356 aa22.31■■□□□ 1.16
PNKP-215ENST00000600910 EXTL3O43909 919 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 AKAP3O75969 853 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 LDHAP00338 332 aaKnown RBP22.3■■□□□ 1.16
PNKP-215ENST00000600910 FPGSQ05932 587 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 TRAIPQ9BWF2 469 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 TSPYL2Q9H2G4 693 aaPredicted RBP22.3■■□□□ 1.16
PNKP-215ENST00000600910 NXF3Q9H4D5 531 aaKnown RBP22.3■■□□□ 1.16
PNKP-215ENST00000600910 IL23AQ9NPF7 189 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 SAMSN1Q9NSI8 373 aaKnown RBP22.3■■□□□ 1.16
PNKP-215ENST00000600910 FANCLQ9NW38 375 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 FRMD4BQ9Y2L6 1034 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 HES2Q9Y543 173 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 IPPQ9Y573 584 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 PCDHB2Q9Y5E7 798 aa22.3■■□□□ 1.16
PNKP-215ENST00000600910 FGFR1OPO95684 399 aaKnown RBP22.29■■□□□ 1.16
PNKP-215ENST00000600910 PFKMP08237 780 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 ACRP10323 421 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 TNFSF9P41273 254 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 PPIGQ13427 754 aaKnown RBP eCLIP22.29■■□□□ 1.165e-7■■■■□ 22.9
PNKP-215ENST00000600910 HSP90AA4PQ58FG1 418 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 CRELD2Q6UXH1 353 aaPredicted RBP22.29■■□□□ 1.16
PNKP-215ENST00000600910 FAM43BQ6ZT52 329 aaPredicted RBP22.29■■□□□ 1.16
PNKP-215ENST00000600910 CBWD2Q8IUF1 395 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 FBXL18Q96ME1 805 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 THAP9Q9H5L6 903 aa22.29■■□□□ 1.16
PNKP-215ENST00000600910 A0A0U1RQF3 1178 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 STAG3L1P0CL83 205 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 PSMC2P35998 433 aaKnown RBP22.28■■□□□ 1.16
PNKP-215ENST00000600910 GRM5P41594 1212 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 SNRNP35Q16560 246 aaKnown RBP22.28■■□□□ 1.16
PNKP-215ENST00000600910 FILIP1Q7Z7B0 1213 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 TMEM192Q8IY95 271 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 SMG8Q8ND04 991 aaKnown RBP22.28■■□□□ 1.16
PNKP-215ENST00000600910 HSD3B7Q9H2F3 369 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 KIAA1586Q9HCI6 787 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 NR2E3Q9Y5X4 410 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 C9IYK1 514 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 ENPP3O14638 875 aa22.28■■□□□ 1.16
PNKP-215ENST00000600910 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms