RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 MFAP3P55082 362 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 TAF3Q5VWG9 929 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 SLC47A2Q86VL8 602 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 IFT20Q8IY31 132 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 PCDHB18PQ96TA0 734 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 R3HDMLQ9H3Y0 253 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 ELP3Q9H9T3 547 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 NOCTQ9UK39 431 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 CHRNB2P17787 502 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 CARSP49589 748 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 EPHB4P54760 987 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 TNNC1P63316 161 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 OTUD5Q96G74 571 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.34■■□□□ 1.333e-7■■■□□ 16.8
GRAMD1A-212ENST00000600231 AP1M1Q9BXS5 423 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 DHX33Q9H6R0 707 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 NOC2LQ9Y3T9 749 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 PGRMC1O00264 195 aaKnown RBP23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 RAD51CO43502 376 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 CYP2C19P33261 490 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 USP37Q86T82 979 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 RIN2Q8WYP3 895 aaPredicted RBP23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 PAGR1Q9BTK6 254 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 PRDM4Q9UKN5 801 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 LIG4P49917 911 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 ASAP3Q8TDY4 903 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 CLMNQ96JQ2 1002 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 NT5C1BQ96P26 610 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 PORCNQ9H237 461 aa23.33■■□□□ 1.33
GRAMD1A-212ENST00000600231 IGKV6D-21A0A0A0MT36 114 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 GSTTP1A0A1W2PQM5 241 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 H0YCG3 227 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 AGPSO00116 658 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 FARP2O94887 1054 aaPredicted RBP23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 GLRA2P23416 452 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 EDNRBP24530 442 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 GTF2H1P32780 548 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 GGCXP38435 758 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 EMBQ6PCB8 327 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 RASGEF1CQ8N431 466 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 TATDN2Q93075 761 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 PCYT2Q99447 389 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 NFU1Q9UMS0 254 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 ZNF233A6NK53 670 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 IRX3P78415 501 aaPredicted RBP23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 TRADDQ15628 312 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 EEPD1Q7L9B9 569 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 IFT81Q8WYA0 676 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 CEP89Q96ST8 783 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 PI4K2AQ9BTU6 479 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
GRAMD1A-212ENST00000600231 MOB2Q70IA6 237 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 ZNF516Q92618 1163 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 CHORDC1Q9UHD1 332 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 A0A0G2JLL6 359 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 LRRIQ4A6NIV6 560 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 RTN2O75298 545 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 MMEP08473 750 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 IREB2P48200 963 aaKnown RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 PRRT2Q7Z6L0 340 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 RHOT2Q8IXI1 618 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 SLC7A3Q8WY07 619 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 DHX38Q92620 1227 aaKnown RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 CALR3Q96L12 384 aaKnown RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 NIFKQ9BYG3 293 aaKnown RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 RNF181Q9P0P0 153 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 CTTNBP2NLQ9P2B4 639 aa23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 ZHX1Q9UKY1 873 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-212ENST00000600231 DDX3YO15523 660 aaKnown RBP23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 EXTL3O43909 919 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 ARL2P36404 184 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 STRN3Q13033 797 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 LMBRD2Q68DH5 695 aaPredicted RBP23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 CASKIN2Q8WXE0 1202 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 ASCC2Q9H1I8 757 aaPredicted RBP23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 KCNG1Q9UIX4 513 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 KRIT1O00522 736 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 RNF40O75150 1001 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 ITGA4P13612 1032 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 CYP11B1P15538 503 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 WNT7BP56706 349 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 GPC5P78333 572 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 FMO1Q01740 532 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 DCAF12L1Q5VU92 463 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 PROCA1Q8NCQ7 364 aaPredicted RBP23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 CAVIN3Q969G5 261 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 EXOC4Q96A65 974 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 DDX47Q9H0S4 455 aaKnown RBP23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 A0A0G2JMZ2 1700 aa23.3■■□□□ 1.32
GRAMD1A-212ENST00000600231 GOLGA6BA6NDN3 693 aa23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 SART1O43290 800 aaKnown RBP23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 GZMAP12544 262 aa23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 ABCD1P33897 745 aa23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 NAMPTP43490 491 aa23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 ACOT2P49753 483 aa23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 NLRP11P59045 1033 aaKnown RBP23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 TSEN2Q8NCE0 465 aaKnown RBP23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 DEPTORQ8TB45 409 aa23.29■■□□□ 1.32
GRAMD1A-212ENST00000600231 ZBTB45Q96K62 511 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms