RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 ZC3H3Q8IXZ2 948 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 SMG8Q8ND04 991 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 NELFBQ8WX92 580 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 CBWD1Q9BRT8 395 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 ANKFY1Q9P2R3 1169 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 DACH1Q9UI36 760 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 RWDD2AQ9UIY3 292 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 PCDHB2Q9Y5E7 798 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
CHMP2A-206ENST00000600118 TET1Q8NFU7 2136 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 KIAA0391O15091 583 aaKnown RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 NPTXRO95502 500 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 FGBP02675 491 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 ACTN1P12814 892 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 RAB27AP51159 221 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 ZNF445P59923 1031 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 RASIP1Q5U651 963 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 ANKRD40Q6AI12 368 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 APBB1IPQ7Z5R6 666 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 ZBTB33Q86T24 672 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 FBXL18Q96ME1 805 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 DUSP9Q99956 384 aaKnown RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 GDF15Q99988 308 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.82□□□□□ -0.21e-9■■□□□ 11.7
CHMP2A-206ENST00000600118 TCHPQ9BT92 498 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 HSPBP1Q9NZL4 362 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 CTNND2Q9UQB3 1225 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 IPPQ9Y573 584 aa13.82□□□□□ -0.2
CHMP2A-206ENST00000600118 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 TRIM49BA6NDI0 452 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 CLIC2O15247 247 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 OGTO15294 1046 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 NR3C1P04150 777 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 SKIP12755 728 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 GRM5P41594 1212 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.22e-13■■■■■ 126.5
CHMP2A-206ENST00000600118 LRRC55Q6ZSA7 311 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 CEP120Q8N960 986 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 DNAJC25Q9H1X3 360 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 NXF3Q9H4D5 531 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 ELAC1Q9H777 363 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 AGO2Q9UKV8 859 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-206ENST00000600118 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 EXTL3O43909 919 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 EOMESO95936 686 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 HARSP12081 509 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 STX17P56962 302 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 POU5F1Q01860 360 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 MLLT1Q03111 559 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 KYAT1Q16773 422 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 ANO6Q4KMQ2 910 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 ZBTB41Q5SVQ8 909 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 TSG101Q99816 390 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 TRIM6Q9C030 488 aaPredicted RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 PCIF1Q9H4Z3 704 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 TMEM161AQ9NX61 479 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 HES2Q9Y543 173 aa13.8□□□□□ -0.2
CHMP2A-206ENST00000600118 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 ADRB2P07550 413 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 CLTAP09496 248 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 NR2F2P24468 414 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 CYP2J2P51589 502 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 DEFB103AP81534 67 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 ADAM9Q13443 819 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 LRSAM1Q6UWE0 723 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 AGMOQ6ZNB7 445 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 TMEM192Q8IY95 271 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 GPD1LQ8N335 351 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 ENOX1Q8TC92 643 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 SAAL1Q96ER3 474 aa13.79□□□□□ -0.2
CHMP2A-206ENST00000600118 BPIFA3Q9BQP9 254 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms