RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 CDR2LQ86X02 465 aaPredicted RBP19.38■□□□□ 0.69
USHBP1-209ENST00000598570 COLGALT2Q8IYK4 626 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 HACE1Q8IYU2 909 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 IQUBQ8NA54 791 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 ZNF558Q96NG5 402 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 TARS2Q9BW92 718 aaKnown RBP19.38■□□□□ 0.69
USHBP1-209ENST00000598570 SCAND2PQ9GZW5 306 aaPredicted RBP19.38■□□□□ 0.69
USHBP1-209ENST00000598570 TNMDQ9H2S6 317 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 ALG13Q9NP73 1137 aaKnown RBP19.38■□□□□ 0.69
USHBP1-209ENST00000598570 OLFML3Q9NRN5 406 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 SPG21Q9NZD8 308 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 HPSEQ9Y251 543 aa19.38■□□□□ 0.69
USHBP1-209ENST00000598570 TOM1L1O75674 476 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 MCF2P10911 925 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 GAP43P17677 238 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 STAT6P42226 847 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 ME1P48163 572 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
USHBP1-209ENST00000598570 CTC1Q2NKJ3 1217 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 TIGD5Q53EQ6 642 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 MYCT1Q8N699 235 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 RASSF8Q8NHQ8 419 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 MRPS27Q92552 414 aaKnown RBP19.37■□□□□ 0.69
USHBP1-209ENST00000598570 GAD1Q99259 594 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 PANK2Q9BZ23 570 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 MAGEF1Q9HAY2 307 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 TBX20Q9UMR3 447 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 STYXL1Q9Y6J8 313 aa19.37■□□□□ 0.69
USHBP1-209ENST00000598570 ADRB2P07550 413 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 GRM5P41594 1212 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 ALDH7A1P49419 539 aaKnown RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 MCL1Q07820 350 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 DHX8Q14562 1220 aaKnown RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 FOXD4L6Q3SYB3 417 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 LONRF3Q496Y0 759 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 FOXD4L3Q6VB84 417 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 APBB1IPQ7Z5R6 666 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 RNF168Q8IYW5 571 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 URGCPQ8TCY9 931 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 POF1BQ8WVV4 589 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 CHAMP1Q96JM3 812 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 ZFP42Q96MM3 310 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 C7orf25Q9BPX7 421 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 PYM1Q9BRP8 204 aaKnown RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 ADPGKQ9BRR6 497 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 TRIM6Q9C030 488 aaPredicted RBP19.36■□□□□ 0.69
USHBP1-209ENST00000598570 LRRC27Q9C0I9 530 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 CDT1Q9H211 546 aa19.36■□□□□ 0.69
USHBP1-209ENST00000598570 TDRD15B5MCY1 1934 aaKnown RBP19.35■□□□□ 0.69
USHBP1-209ENST00000598570 A0A1W2PQ27 194 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 A0A1W2PQ64 194 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 A0A1W2PQD8 194 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 PTGESO14684 152 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 NCK2O43639 380 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 FAM189A1O60320 539 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 FAM13AO94988 1023 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 AKAP5P24588 427 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 EHHADHQ08426 723 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 MPZL3Q6UWV2 235 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 DDX53Q86TM3 631 aaKnown RBP19.35■□□□□ 0.69
USHBP1-209ENST00000598570 MAP4K3Q8IVH8 894 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 HVCN1Q96D96 273 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 IGSF21Q96ID5 467 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 TRIM9Q9C026 710 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 HAPLN2Q9GZV7 340 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 NSUN3Q9H649 340 aaKnown RBP19.35■□□□□ 0.69
USHBP1-209ENST00000598570 DNAJB4Q9UDY4 337 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 STK39Q9UEW8 545 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 COG5Q9UP83 839 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 IRAK3Q9Y616 596 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 TRIP11Q15643 1979 aa19.35■□□□□ 0.69
USHBP1-209ENST00000598570 XIRP2A4UGR9 3374 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 MEFVO15553 781 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-209ENST00000598570 ALDH2P05091 517 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 MLH1P40692 756 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 SLC11A1P49279 550 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 ERVFC1P60507 584 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 STRN3Q13033 797 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 TMEM173Q86WV6 379 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-209ENST00000598570 FAM178BQ8IXR5 827 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 PDILTQ8N807 584 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 BCL7CQ8WUZ0 217 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-209ENST00000598570 ATXN2LQ8WWM7 1075 aaKnown RBP19.34■□□□□ 0.69
USHBP1-209ENST00000598570 SPATA32Q96LK8 384 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 VN1R3Q9BXE9 311 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 CXCL16Q9H2A7 254 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 SNTG2Q9NY99 539 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 USP25Q9UHP3 1055 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 KCNH3Q9ULD8 1083 aa19.34■□□□□ 0.69
USHBP1-209ENST00000598570 CIZ1Q9ULV3 898 aaPredicted RBP19.34■□□□□ 0.69
USHBP1-209ENST00000598570 SPTBN5Q9NRC6 3674 aaKnown RBP19.34■□□□□ 0.69
USHBP1-209ENST00000598570 A0A0B4J269 797 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 POLR2DO15514 142 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 TBCAO75347 108 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 RECQL4O94761 1208 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 POMCP01189 267 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 KRT18P05783 430 aaKnown RBP19.33■□□□□ 0.68
USHBP1-209ENST00000598570 SLFN14P0C7P3 912 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 KCNE1P15382 129 aa19.33■□□□□ 0.68
USHBP1-209ENST00000598570 IBSPP21815 317 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms