RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
ZNF548-206ENST00000597047 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
ZNF548-206ENST00000597047 NXF3Q9H4D5 531 aaKnown RBP10.17□□□□□ -0.78
ZNF548-206ENST00000597047 ST6GALNAC4Q9H4F1 302 aa10.17□□□□□ -0.78
ZNF548-206ENST00000597047 C1orf112Q9NSG2 853 aa10.17□□□□□ -0.78
ZNF548-206ENST00000597047 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
ZNF548-206ENST00000597047 TNFSF13BQ9Y275 285 aa10.17□□□□□ -0.78
ZNF548-206ENST00000597047 IPPQ9Y573 584 aa10.17□□□□□ -0.78
ZNF548-206ENST00000597047 MICAL3Q7RTP6 2002 aa10.17□□□□□ -0.78
ZNF548-206ENST00000597047 SYCE3A1L190 88 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TBKBP1A7MCY6 615 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TLL1O43897 1013 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TOM1L1O75674 476 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 PPP1R37O75864 691 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 SKIP12755 728 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 CD44P16070 742 aaKnown RBP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 HOXD13P35453 343 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TNFSF9P41273 254 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 YARSP54577 528 aaKnown RBP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 NLRP12P59046 1061 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 SPAG1Q07617 926 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 EHHADHQ08426 723 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 NOLC1Q14978 699 aaKnown RBP eCLIP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TPD52L1Q16890 204 aaPredicted RBP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 DCAF4L1Q3SXM0 396 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 CEP135Q66GS9 1140 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 SLFN12LQ6IEE8 588 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 SLC39A4Q6P5W5 647 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 ZPBP2Q6X784 338 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 EPM2AIP1Q7L775 607 aaPredicted RBP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TMEM192Q8IY95 271 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 ZSWIM2Q8NEG5 633 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 NELFBQ8WX92 580 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 EEF2KMTQ96G04 330 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 YME1L1Q96TA2 773 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 TSG101Q99816 390 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 CBWD1Q9BRT8 395 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 CCDC94Q9BW85 323 aaPredicted RBP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 STRA6Q9BX79 667 aa10.16□□□□□ -0.78
ZNF548-206ENST00000597047 AGO2Q9UKV8 859 aaKnown RBP10.16□□□□□ -0.78
ZNF548-206ENST00000597047 UBE4BO95155 1302 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 A0A0U1RQF3 1178 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 TRIM49BA6NDI0 452 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 C9IYK1 514 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 PSMA7O14818 248 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 EXOC3O60645 756 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 POMCP01189 267 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 MCF2P10911 925 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 MYOGP15173 224 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 BMP6P22004 513 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 SCP2P22307 547 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 RAB27AP51159 221 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 RNASELQ05823 741 aaKnown RBP10.15□□□□□ -0.78
ZNF548-206ENST00000597047 ZBTB41Q5SVQ8 909 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 FAM109BQ6ICB4 259 aaPredicted RBP10.15□□□□□ -0.78
ZNF548-206ENST00000597047 NPAS4Q8IUM7 802 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 TDHQ8IZJ6 230 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 GUF1Q8N442 669 aaKnown RBP10.15□□□□□ -0.78
ZNF548-206ENST00000597047 SMG8Q8ND04 991 aaKnown RBP10.15□□□□□ -0.78
ZNF548-206ENST00000597047 SPATA20Q8TB22 786 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 ACAP3Q96P50 834 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 RPS6KC1Q96S38 1066 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 HAPLN2Q9GZV7 340 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 SEMA6BQ9H3T3 888 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 RPF1Q9H9Y2 349 aaKnown RBP10.15□□□□□ -0.78
ZNF548-206ENST00000597047 RSAD1Q9HA92 442 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 AGPAT3Q9NRZ7 376 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 TMEM161AQ9NX61 479 aa10.15□□□□□ -0.78
ZNF548-206ENST00000597047 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 OGTO15294 1046 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 TGFB1I1O43294 461 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 RECQL4O94761 1208 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 CLSTN1O94985 981 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
ZNF548-206ENST00000597047 ADSSP30520 456 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 MLH1P40692 756 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 TYRO3Q06418 890 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 MCL1Q07820 350 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 BTG3Q14201 252 aaPredicted RBP10.14□□□□□ -0.79
ZNF548-206ENST00000597047 DPCR1Q3MIW9 517 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 HABP4Q5JVS0 413 aaKnown RBP10.14□□□□□ -0.79
ZNF548-206ENST00000597047 GLRA4Q5JXX5 417 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 ANKRD40Q6AI12 368 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 GLB1LQ6UWU2 654 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 HERC6Q8IVU3 1022 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 ADSSL1Q8N142 457 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 TRIML1Q8N9V2 468 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 URGCPQ8TCY9 931 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 P2RX5Q93086 422 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 TOP1MTQ969P6 601 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 FAM193BQ96PV7 902 aaPredicted RBP10.14□□□□□ -0.79
ZNF548-206ENST00000597047 SLC9A7Q96T83 725 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 GAD1Q99259 594 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 GTPBP4Q9BZE4 634 aaKnown RBP10.14□□□□□ -0.79
ZNF548-206ENST00000597047 PTPRHQ9HD43 1115 aa10.14□□□□□ -0.79
ZNF548-206ENST00000597047 TYW1Q9NV66 732 aaKnown RBP10.14□□□□□ -0.79
ZNF548-206ENST00000597047 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms