RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PDE12Q6L8Q7 609 aaKnown RBP23.19■■□□□ 1.3
PNKP-209ENST00000596726 TMEM175Q9BSA9 504 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 UBE2ZQ9H832 354 aaPredicted RBP23.19■■□□□ 1.3
PNKP-209ENST00000596726 PTPRHQ9HD43 1115 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 PUF60Q9UHX1 559 aaKnown RBP23.19■■□□□ 1.3
PNKP-209ENST00000596726 TRIP11Q15643 1979 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 A0A087X0B3 334 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 NCK2O43639 380 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 MAPTP10636 758 aaKnown RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 SCNN1GP51170 649 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 NCKAP1LP55160 1127 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 DSC1Q08554 894 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 CTC1Q2NKJ3 1217 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 DCAF4L1Q3SXM0 396 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 FOXD4L6Q3SYB3 417 aaPredicted RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 TJAP1Q5JTD0 557 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 FOXD4L3Q6VB84 417 aaPredicted RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 CCDC73Q6ZRK6 1079 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 ADGRD2Q7Z7M1 963 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 TMEM173Q86WV6 379 aaPredicted RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 PABPC5Q96DU9 382 aaKnown RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 IGSF21Q96ID5 467 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 FAM193BQ96PV7 902 aaPredicted RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 MRPL4Q9BYD3 311 aaKnown RBP23.18■■□□□ 1.3
PNKP-209ENST00000596726 GBP3Q9H0R5 595 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 PCDHGC5Q9Y5F6 944 aa23.18■■□□□ 1.3
PNKP-209ENST00000596726 CUTAO60888 179 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 AAK1Q2M2I8 961 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 AXDND1Q5T1B0 1012 aaPredicted RBP23.17■■□□□ 1.3
PNKP-209ENST00000596726 COLGALT2Q8IYK4 626 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 TMEM169Q96HH4 297 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 TARS2Q9BW92 718 aaKnown RBP23.17■■□□□ 1.3
PNKP-209ENST00000596726 PARVGQ9HBI0 331 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 SNTG2Q9NY99 539 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 KLK14Q9P0G3 267 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 PARP2Q9UGN5 583 aa23.17■■□□□ 1.3
PNKP-209ENST00000596726 H0YCG3 227 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 ABLIM1O14639 778 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 FAM13AO94988 1023 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 ALDH2P05091 517 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 PROZP22891 400 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 GTF2F1P35269 517 aaKnown RBP eCLIP23.16■■□□□ 1.3
PNKP-209ENST00000596726 DNM1Q05193 864 aaKnown RBP23.16■■□□□ 1.3
PNKP-209ENST00000596726 KCNG4Q8TDN1 519 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 BCL7CQ8WUZ0 217 aaPredicted RBP23.16■■□□□ 1.3
PNKP-209ENST00000596726 PPP2R3CQ969Q6 453 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 FIZ1Q96SL8 496 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 PANK2Q9BZ23 570 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 RCOR1Q9UKL0 485 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 CFAP45Q9UL16 551 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 VCANP13611 3396 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 TCF20Q9UGU0 1960 aaKnown RBP23.16■■□□□ 1.3
PNKP-209ENST00000596726 TCHHQ07283 1943 aa23.16■■□□□ 1.3
PNKP-209ENST00000596726 NRP1O14786 923 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 RECQL4O94761 1208 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 KRT18P05783 430 aaKnown RBP23.15■■□□□ 1.3
PNKP-209ENST00000596726 SCP2P22307 547 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 STRN3Q13033 797 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 BECN1Q14457 450 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 SHC4Q6S5L8 630 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 SV2BQ7L1I2 683 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 HAUS6Q7Z4H7 955 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 APBB1IPQ7Z5R6 666 aaPredicted RBP23.15■■□□□ 1.3
PNKP-209ENST00000596726 DDX53Q86TM3 631 aaKnown RBP23.15■■□□□ 1.3
PNKP-209ENST00000596726 MYCT1Q8N699 235 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 MICAL1Q8TDZ2 1067 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 TCF25Q9BQ70 676 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 CDT1Q9H211 546 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 NGRNQ9NPE2 291 aaKnown RBP23.15■■□□□ 1.3
PNKP-209ENST00000596726 FAN1Q9Y2M0 1017 aa23.15■■□□□ 1.3
PNKP-209ENST00000596726 MYMKA6NI61 221 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 BMP1P13497 986 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 LTBRP36941 435 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 STAT6P42226 847 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 GRIK3Q13003 919 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 ADAM15Q13444 863 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 LEXMQ3ZCV2 418 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 DNAJC19Q96DA6 116 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 PCDHA7Q9UN72 937 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 CITO14578 2027 aa23.14■■□□□ 1.29
PNKP-209ENST00000596726 PTGESO14684 152 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 TRAK2O60296 914 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 TBCAO75347 108 aaKnown RBP23.13■■□□□ 1.29
PNKP-209ENST00000596726 KCNA5P22460 613 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 KCNQ1P51787 676 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 PLPP4Q5VZY2 271 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 MPZL3Q6UWV2 235 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 ZPBP2Q6X784 338 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 TMC7Q7Z402 723 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 EFHBQ8N7U6 833 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 DDX12PQ92771 950 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 ZBTB45Q96K62 511 aaPredicted RBP23.13■■□□□ 1.29
PNKP-209ENST00000596726 RPS6KC1Q96S38 1066 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 VN1R3Q9BXE9 311 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 COL25A1Q9BXS0 654 aaPredicted RBP23.13■■□□□ 1.29
PNKP-209ENST00000596726 ZBP1Q9H171 429 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 CXCL16Q9H2A7 254 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 IGFLR1Q9H665 355 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 TLE6Q9H808 572 aa23.13■■□□□ 1.29
PNKP-209ENST00000596726 ENTPD7Q9NQZ7 604 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms