RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KLK14Q9P0G3 267 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 CACNG4Q9UBN1 327 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 PHLPP2Q6ZVD8 1323 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 LOC730098B7Z3J9 87 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 N4BP3O15049 544 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 CXCL14O95715 111 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 SRGAP2BP0DMP2 458 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 EPCAMP16422 314 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 OR1G1P47890 313 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 GRIK3Q13003 919 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 PRPF4BQ13523 1007 aaKnown RBP14.41□□□□□ -0.1
LIG1-212ENST00000596549 CBX2Q14781 532 aaPredicted RBP14.41□□□□□ -0.1
LIG1-212ENST00000596549 PPP2R5AQ15172 486 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 MAPK6Q16659 721 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 KRT79Q5XKE5 535 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 LRRC15Q8TF66 581 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 SLC22A17Q8WUG5 538 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 KIFAP3Q92845 792 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 FAM193BQ96PV7 902 aaPredicted RBP14.41□□□□□ -0.1
LIG1-212ENST00000596549 PHF7Q9BWX1 381 aaPredicted RBP14.41□□□□□ -0.1
LIG1-212ENST00000596549 MUTYHQ9UIF7 546 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 FAN1Q9Y2M0 1017 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.41□□□□□ -0.1
LIG1-212ENST00000596549 STK24Q9Y6E0 443 aa14.41□□□□□ -0.1
LIG1-212ENST00000596549 ANK1P16157 1881 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 VWA3AA6NCI4 1184 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 ACKR2O00590 384 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 PTGESO14684 152 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 DCXO43602 365 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 GPR37L1O60883 481 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 LILRB3O75022 631 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 HIP1RO75146 1068 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 RECQL4O94761 1208 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 SOD2P04179 222 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
LIG1-212ENST00000596549 LIG1P18858 919 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 NAB2Q15742 525 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 TMEM31Q5JXX7 168 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 NT5DC1Q5TFE4 455 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 RINT1Q6NUQ1 792 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 C1orf186Q6ZWK4 172 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 TAS1R3Q7RTX0 852 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 TAS1R1Q7RTX1 841 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 RNF135Q8IUD6 432 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 HACE1Q8IYU2 909 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 PAAF1Q9BRP4 392 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 BACH2Q9BYV9 841 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 SNTG2Q9NY99 539 aa14.4□□□□□ -0.1
LIG1-212ENST00000596549 ALDH2P05091 517 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 CNPP09543 421 aaKnown RBP14.39□□□□□ -0.11
LIG1-212ENST00000596549 HOXB8P17481 243 aaPredicted RBP14.39□□□□□ -0.11
LIG1-212ENST00000596549 NPTX2P47972 431 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 CLCN4P51793 760 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 PEX3P56589 373 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 GRIN1Q05586 938 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 GIT2Q14161 759 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 TMEM119Q4V9L6 283 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
LIG1-212ENST00000596549 ARL6IP4Q66PJ3 421 aaKnown RBP14.39□□□□□ -0.11
LIG1-212ENST00000596549 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 CEP120Q8N960 986 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 RABGGTAQ92696 567 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 RPS6KC1Q96S38 1066 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 PLIN2Q99541 437 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 POMKQ9H5K3 350 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 PARP2Q9UGN5 583 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 DNM3Q9UQ16 869 aa14.39□□□□□ -0.11
LIG1-212ENST00000596549 URODP06132 367 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 WEE2P0C1S8 567 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 ALADP13716 330 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 SLC12A3P55017 1021 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 ZRSR1Q15695 479 aaKnown RBP14.38□□□□□ -0.11
LIG1-212ENST00000596549 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
LIG1-212ENST00000596549 ATF7IP2Q5U623 682 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 FUT10Q6P4F1 479 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 C12orf76Q8N812 135 aaPredicted RBP14.38□□□□□ -0.11
LIG1-212ENST00000596549 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 TECTAO75443 2155 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 TSC2P49815 1807 aa14.38□□□□□ -0.11
LIG1-212ENST00000596549 VPS37CA5D8V6 355 aaPredicted RBP14.37□□□□□ -0.11
LIG1-212ENST00000596549 CASTOR2A6NHX0 329 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 C2CD2LO14523 706 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 ABLIM1O14639 778 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 KIF4AO95239 1232 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 SP100P23497 879 aaPredicted RBP14.37□□□□□ -0.11
LIG1-212ENST00000596549 GUCY2CP25092 1073 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 GLUD2P49448 558 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 EFNA5P52803 228 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 DMP1Q13316 513 aaPredicted RBP14.37□□□□□ -0.11
LIG1-212ENST00000596549 TUSC3Q13454 348 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
LIG1-212ENST00000596549 TMEM132AQ24JP5 1023 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 DCAF4L1Q3SXM0 396 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
LIG1-212ENST00000596549 RARS2Q5T160 578 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms