RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 EEF1DP3Q658K8 133 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 TAS1R3Q7RTX0 852 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 RBM23Q86U06 439 aaKnown RBP14.38□□□□□ -0.11
USE1-207ENST00000596136 FAM178BQ8IXR5 827 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 CALML4Q96GE6 196 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 CDK5RAP3Q96JB5 506 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 NECAB3Q96P71 396 aaPredicted RBP14.38□□□□□ -0.11
USE1-207ENST00000596136 PLIN2Q99541 437 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 VN1R3Q9BXE9 311 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 ZBP1Q9H171 429 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 PTPRHQ9HD43 1115 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 ENTPD7Q9NQZ7 604 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
USE1-207ENST00000596136 TNFSF13BQ9Y275 285 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
USE1-207ENST00000596136 CCDC169A6NNP5 214 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 PER2O15055 1255 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 PLS3P13797 630 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 IL9P15248 144 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 SCNN1GP51170 649 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 SLC39A14Q15043 492 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 SMAD2Q15796 467 aaKnown RBP14.37□□□□□ -0.11
USE1-207ENST00000596136 DCAF4L1Q3SXM0 396 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 EP400NLQ6ZTU2 488 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 RNF168Q8IYW5 571 aaPredicted RBP14.37□□□□□ -0.11
USE1-207ENST00000596136 VPS52Q8N1B4 723 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 VN1R2Q8NFZ6 395 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 FAM193BQ96PV7 902 aaPredicted RBP14.37□□□□□ -0.11
USE1-207ENST00000596136 ACO2Q99798 780 aaKnown RBP14.37□□□□□ -0.11
USE1-207ENST00000596136 ADPGKQ9BRR6 497 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 KMT5AQ9NQR1 393 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 CD207Q9UJ71 328 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 ODF2LQ9ULJ1 636 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 FAM50BQ9Y247 325 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 USP20Q9Y2K6 914 aa14.37□□□□□ -0.11
USE1-207ENST00000596136 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 MBTPS2O43462 519 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 CXCL14O95715 111 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
USE1-207ENST00000596136 PLCG1P19174 1290 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 PROZP22891 400 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 NASPP49321 788 aaPredicted RBP14.36□□□□□ -0.11
USE1-207ENST00000596136 NDUFV1P49821 464 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 GRIK3Q13003 919 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 SMAD4Q13485 552 aaKnown RBP14.36□□□□□ -0.11
USE1-207ENST00000596136 GIT2Q14161 759 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 BMS1Q14692 1282 aaKnown RBP14.36□□□□□ -0.11
USE1-207ENST00000596136 KARSQ15046 597 aaKnown RBP14.36□□□□□ -0.11
USE1-207ENST00000596136 ATF7IP2Q5U623 682 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 SMRP1Q8NCR6 262 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 TMEM161BQ8NDZ6 487 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 RAD54LQ92698 747 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 USP28Q96RU2 1077 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 APOL6Q9BWW8 343 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 MARCH5Q9NX47 278 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 PRKAG3Q9UGI9 489 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 PARP2Q9UGN5 583 aa14.36□□□□□ -0.11
USE1-207ENST00000596136 TRIP11Q15643 1979 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 ABLIM1O14639 778 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 PTGESO14684 152 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 SLC16A4O15374 487 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 LILRB3O75022 631 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 BRD1O95696 1058 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
USE1-207ENST00000596136 DDIT3P35638 169 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 ZNF131P52739 623 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 SMTNP53814 917 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 NAB2Q15742 525 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 EPSTI1Q96J88 318 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 MRPL4Q9BYD3 311 aaKnown RBP14.35□□□□□ -0.11
USE1-207ENST00000596136 SNTG2Q9NY99 539 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 KLK14Q9P0G3 267 aa14.35□□□□□ -0.11
USE1-207ENST00000596136 LARSQ9P2J5 1176 aaKnown RBP14.35□□□□□ -0.11
USE1-207ENST00000596136 NPHP3-ACAD11A0A0J9YXS1 232 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 C19orf67A6NJJ6 358 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 CLASP2O75122 1294 aaKnown RBP14.34□□□□□ -0.11
USE1-207ENST00000596136 RECQL4O94761 1208 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 SOD2P04179 222 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
USE1-207ENST00000596136 LIG1P18858 919 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 SCP2P22307 547 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 OR1G1P47890 313 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 NCKAP1LP55160 1127 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 RBM10P98175 930 aaKnown RBP14.34□□□□□ -0.11
USE1-207ENST00000596136 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 MCM6Q14566 821 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 PTPN14Q15678 1187 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 ALKAL1Q6UXT8 129 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 APBB1IPQ7Z5R6 666 aaPredicted RBP14.34□□□□□ -0.11
USE1-207ENST00000596136 GPBP1Q86WP2 473 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 GPR65Q8IYL9 337 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 LINC00301Q8NCQ3 95 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms