RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TAF2Q6P1X5 1199 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 ZPBP2Q6X784 338 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 SRGAP1Q7Z6B7 1085 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 FRMD5Q7Z6J6 570 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 XXYLT1Q8NBI6 393 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 POMGNT1Q8WZA1 660 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 MKNK1Q9BUB5 465 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 TARS2Q9BW92 718 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 FZD8Q9H461 694 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 PRDM12Q9H4Q4 367 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 EPHX3Q9H6B9 360 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 PRMT7Q9NVM4 692 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 A0A1B0GTH6 734 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 PIGRP01833 764 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 RPLP2P05387 115 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 ITGB8P26012 769 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 CDC25BP30305 580 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 HOXC8P31273 242 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 CASP4P49662 377 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 NCBP1Q09161 790 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 TMEM62Q0P6H9 643 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 PRPF4BQ13523 1007 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 MAN2A1Q16706 1144 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 VWA3BQ502W6 1294 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 FAM186BQ8IYM0 893 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 RDH13Q8NBN7 331 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 TMEM174Q8WUU8 243 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 CBWD1Q9BRT8 395 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 TCHPQ9BT92 498 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 CCDC113Q9H0I3 377 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 ADAMTS10Q9H324 1103 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 IFT122Q9HBG6 1241 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 RTN4Q9NQC3 1192 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 STARD7Q9NQZ5 370 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 HSPBP1Q9NZL4 362 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 CHD7Q9P2D1 2997 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 ARMCX3Q9UH62 379 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 NOD1Q9Y239 953 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 GINS2Q9Y248 185 aa14.25□□□□□ -0.13
SHKBP1-209ENST00000595803 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 TISP43B9A030 160 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 M0QZ92 97 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 AKAP3O75969 853 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 LDHAP00338 332 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 BMP1P13497 986 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 KRT13P13646 458 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 MARSP56192 900 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 UBXN1Q04323 297 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 MBTD1Q05BQ5 628 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 ADGRE1Q14246 886 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 PTGISQ16647 500 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 FAM187BQ17R55 369 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 KIZQ2M2Z5 673 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 APTXQ7Z2E3 356 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 SPC24Q8NBT2 197 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 ACO2Q99798 780 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 SEZ6LQ9BYH1 1024 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 KIAA1586Q9HCI6 787 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 USP20Q9Y2K6 914 aa14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHKBP1-209ENST00000595803 A0A0U1RQG5 324 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 A0A1W2PQ45 241 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 A0A1W2PQY0 241 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 GOLGA8IPA6NC78 632 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 GOLGA8JA6NMD2 632 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 GOLGA6L6A8MZA4 724 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 TULP1O00294 542 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 CLDN3O15551 220 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 TEX33O43247 280 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 GPR32O75388 356 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 PTMAP06454 111 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 ADSSP30520 456 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 CRYBB1P53674 252 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 PPP2R3AQ06190 1150 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 SLC39A4Q6P5W5 647 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 GPD1LQ8N335 351 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 PDLIM2Q96JY6 352 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 ZBTB45Q96K62 511 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 CELF4Q9BZC1 486 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 MINDY3Q9H8M7 445 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 CXXC1Q9P0U4 656 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 AGO2Q9UKV8 859 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 STYXL1Q9Y6J8 313 aa14.23□□□□□ -0.13
SHKBP1-209ENST00000595803 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 ZNF233A6NK53 670 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 LGALS16A8MUM7 142 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 ARVCFO00192 962 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 MAPK13O15264 365 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 EXTL3O43909 919 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 TOM1L1O75674 476 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 ERLIN2O94905 339 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 IGFBP4P22692 258 aa14.22□□□□□ -0.13
SHKBP1-209ENST00000595803 MRPS6P82932 125 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms