RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TMEM132AQ24JP5 1023 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 IER5LQ5T953 404 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 KIAA1841Q6NSI8 718 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 C4orf32Q8N8J7 132 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 RPS6KC1Q96S38 1066 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 KIFC3Q9BVG8 833 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 HERC2P3Q9BVR0 1158 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 SMOC2Q9H3U7 446 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
CCDC9-202ENST00000595659 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
CCDC9-202ENST00000595659 LIMD1Q9UGP4 676 aa18.85■□□□□ 0.61
CCDC9-202ENST00000595659 NR1I2O75469 434 aa18.84■□□□□ 0.61
CCDC9-202ENST00000595659 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
CCDC9-202ENST00000595659 TOB1P50616 345 aaPredicted RBP18.84■□□□□ 0.61
CCDC9-202ENST00000595659 SIGLEC14Q08ET2 396 aa18.84■□□□□ 0.61
CCDC9-202ENST00000595659 CDCA2Q69YH5 1023 aaPredicted RBP18.84■□□□□ 0.61
CCDC9-202ENST00000595659 BMP8AQ7Z5Y6 402 aa18.84■□□□□ 0.61
CCDC9-202ENST00000595659 ALYREFQ86V81 257 aaKnown RBP18.84■□□□□ 0.61
CCDC9-202ENST00000595659 ASIC4Q96FT7 647 aa18.84■□□□□ 0.61
CCDC9-202ENST00000595659 COLEC11Q9BWP8 271 aa18.84■□□□□ 0.61
CCDC9-202ENST00000595659 FZD8Q9H461 694 aa18.84■□□□□ 0.61
CCDC9-202ENST00000595659 NOL7Q9UMY1 257 aaKnown RBP18.84■□□□□ 0.61
CCDC9-202ENST00000595659 TRIOO75962 3097 aa18.83■□□□□ 0.61
CCDC9-202ENST00000595659 TEX28O15482 410 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 PDGFBP01127 241 aaPredicted RBP18.83■□□□□ 0.6
CCDC9-202ENST00000595659 EDN1P05305 212 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 SPATA31D3P0C874 917 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 GLUD2P49448 558 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 ORC2Q13416 577 aaPredicted RBP18.83■□□□□ 0.6
CCDC9-202ENST00000595659 KIAA0319Q5VV43 1072 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 SPATA31D4Q6ZUB0 917 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 GPR149Q86SP6 731 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 SUGP1Q8IWZ8 645 aaKnown RBP18.83■□□□□ 0.6
CCDC9-202ENST00000595659 FBXL6Q8N531 539 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 TDRD5Q8NAT2 981 aaKnown RBP18.83■□□□□ 0.6
CCDC9-202ENST00000595659 DEPTORQ8TB45 409 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 GPR62Q9BZJ7 368 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 CXCL16Q9H2A7 254 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 BHMT2Q9H2M3 363 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 PDZD7Q9H5P4 517 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 SFXN1Q9H9B4 322 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 MAN1C1Q9NR34 630 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 SNTG2Q9NY99 539 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 STK39Q9UEW8 545 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 LRWD1Q9UFC0 647 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 KIAA1024Q9UPX6 916 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 PCDHB6Q9Y5E3 794 aa18.83■□□□□ 0.6
CCDC9-202ENST00000595659 PP2D1A8MPX8 630 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 BRD1O95696 1058 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 EFEMP2O95967 443 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 PRKCBP05771 671 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 TRAPPC10P48553 1259 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC9-202ENST00000595659 VCPP55072 806 aaKnown RBP18.82■□□□□ 0.6
CCDC9-202ENST00000595659 NHLH1Q02575 133 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 PTGDRQ13258 359 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
CCDC9-202ENST00000595659 EEF1DP3Q658K8 133 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 PALB2Q86YC2 1186 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 GLYCTKQ8IVS8 523 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
CCDC9-202ENST00000595659 PAAF1Q9BRP4 392 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 C2orf40Q9H1Z8 148 aa18.82■□□□□ 0.6
CCDC9-202ENST00000595659 CASTOR2A6NHX0 329 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 N4BP3O15049 544 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 TADA2AO75478 443 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 ADH1AP07327 375 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 CDC25AP30304 524 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 DSG1Q02413 1049 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 GRIK3Q13003 919 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 IL17AQ16552 155 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 MAPK6Q16659 721 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 FAM187BQ17R55 369 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 HAUS3Q68CZ6 603 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 FUT10Q6P4F1 479 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 PRSS33Q8NF86 280 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 HASPINQ8TF76 798 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 RIN2Q8WYP3 895 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-202ENST00000595659 PRIMPOLQ96LW4 560 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 DDX19AQ9NUU7 478 aaKnown RBP18.81■□□□□ 0.6
CCDC9-202ENST00000595659 SORCS3Q9UPU3 1222 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 SSX2IPQ9Y2D8 614 aa18.81■□□□□ 0.6
CCDC9-202ENST00000595659 ARID2Q68CP9 1835 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 ACKR2O00590 384 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 RFPL2O75678 378 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 RECQL4O94761 1208 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 RPL17P18621 184 aaKnown RBP18.8■□□□□ 0.6
CCDC9-202ENST00000595659 U2AF2P26368 475 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC9-202ENST00000595659 NAMPTP43490 491 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 MTMR3Q13615 1198 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 MCTP1Q6DN14 999 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 CCDC113Q9H0I3 377 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 RXFP1Q9HBX9 757 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 CHST7Q9NS84 486 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 ADAM28Q9UKQ2 775 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 GDAQ9Y2T3 454 aa18.8■□□□□ 0.6
CCDC9-202ENST00000595659 TECTAO75443 2155 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms