RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RHOBTB2Q9BYZ6 727 aa26.54■■□□□ 1.84
LSM4-202ENST00000593564 USP34Q70CQ2 3546 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 A0A1B0GUA9 196 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 USO1O60763 962 aaKnown RBP26.53■■□□□ 1.84
LSM4-202ENST00000593564 NEK4P51957 841 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 GSTCDQ8NEC7 633 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 COLEC11Q9BWP8 271 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 TMEM60Q9H2L4 133 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 CHST7Q9NS84 486 aa26.53■■□□□ 1.84
LSM4-202ENST00000593564 A0A087WWV3 80 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 F8W810 466 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 GALR2O43603 387 aaPredicted RBP26.52■■□□□ 1.84
LSM4-202ENST00000593564 GLUD1P00367 558 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 SPATA31C1P0DKV0 1188 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 AKAP5P24588 427 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 CYP26C1Q6V0L0 522 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 GPR65Q8IYL9 337 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 TUFT1Q9NNX1 390 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 FAM86C1Q9NVL1 165 aa26.52■■□□□ 1.84
LSM4-202ENST00000593564 NPTXRO95502 500 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 C1RP00736 705 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 ST3GAL1Q11201 340 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 GRIK3Q13003 919 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 PPP4R3CPQ6ZMV5 832 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 TMEM105Q8N8V8 129 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 MCPH1Q8NEM0 835 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 ATOH1Q92858 354 aaPredicted RBP26.51■■□□□ 1.83
LSM4-202ENST00000593564 PRIMPOLQ96LW4 560 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 GPRC5CQ9NQ84 441 aa26.51■■□□□ 1.83
LSM4-202ENST00000593564 LRRIQ4A6NIV6 560 aa26.5■■□□□ 1.83
LSM4-202ENST00000593564 EIF5BO60841 1220 aaKnown RBP26.5■■□□□ 1.83
LSM4-202ENST00000593564 TDGQ13569 410 aa26.5■■□□□ 1.83
LSM4-202ENST00000593564 CDCA2Q69YH5 1023 aaPredicted RBP26.5■■□□□ 1.83
LSM4-202ENST00000593564 ASTLQ6HA08 431 aaPredicted RBP26.5■■□□□ 1.83
LSM4-202ENST00000593564 CDR2LQ86X02 465 aaPredicted RBP26.5■■□□□ 1.83
LSM4-202ENST00000593564 CATSPER3Q86XQ3 398 aa26.5■■□□□ 1.83
LSM4-202ENST00000593564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.5■■□□□ 1.83
LSM4-202ENST00000593564 PRMT7Q9NVM4 692 aaPredicted RBP26.5■■□□□ 1.83
LSM4-202ENST00000593564 PPP4R2Q9NY27 417 aa26.5■■□□□ 1.83
LSM4-202ENST00000593564 CCDC195A0A1B0GUA6 201 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 MCM7P33993 719 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 SAFBQ15424 915 aaKnown RBP eCLIP26.49■■□□□ 1.83
LSM4-202ENST00000593564 FUT10Q6P4F1 479 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 MAEAQ7L5Y9 396 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 HDAC7Q8WUI4 952 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 POLR3CQ9BUI4 534 aaPredicted RBP26.49■■□□□ 1.83
LSM4-202ENST00000593564 GPR62Q9BZJ7 368 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 MFSD1Q9H3U5 465 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 FZD8Q9H461 694 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 KCNK12Q9HB15 430 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 WDR6Q9NNW5 1121 aaKnown RBP26.49■■□□□ 1.83
LSM4-202ENST00000593564 PARP2Q9UGN5 583 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 ADAM28Q9UKQ2 775 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 C2orf16Q68DN1 1984 aa26.49■■□□□ 1.83
LSM4-202ENST00000593564 ZFHX2Q9C0A1 2572 aaPredicted RBP26.48■■□□□ 1.83
LSM4-202ENST00000593564 TDRD15B5MCY1 1934 aaKnown RBP26.48■■□□□ 1.83
LSM4-202ENST00000593564 H0Y858 1186 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 MED24O75448 989 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 PAPLNO95428 1278 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 ATP2B1P20020 1258 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 CLCN5P51795 746 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 FAM187BQ17R55 369 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 USP41Q3LFD5 358 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 ZBTB8OSQ8IWT0 167 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 STAMQ92783 540 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 NACC1Q96RE7 527 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 PLEKHA4Q9H4M7 779 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 KLK14Q9P0G3 267 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 FNIP2Q9P278 1114 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 IGSF9Q9P2J2 1179 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 DUSP12Q9UNI6 340 aa26.48■■□□□ 1.83
LSM4-202ENST00000593564 N4BP1O75113 896 aaKnown RBP26.47■■□□□ 1.83
LSM4-202ENST00000593564 B3GALT6Q96L58 329 aa26.47■■□□□ 1.83
LSM4-202ENST00000593564 C2orf40Q9H1Z8 148 aa26.47■■□□□ 1.83
LSM4-202ENST00000593564 CLUHO75153 1309 aa26.46■■□□□ 1.83
LSM4-202ENST00000593564 ST18O60284 1047 aa26.46■■□□□ 1.83
LSM4-202ENST00000593564 RFPL2O75678 378 aa26.46■■□□□ 1.83
LSM4-202ENST00000593564 CREMQ03060 361 aa26.46■■□□□ 1.83
LSM4-202ENST00000593564 ORC2Q13416 577 aaPredicted RBP26.46■■□□□ 1.83
LSM4-202ENST00000593564 ERMNQ8TAM6 284 aa26.46■■□□□ 1.83
LSM4-202ENST00000593564 SMG7Q92540 1137 aaKnown RBP26.46■■□□□ 1.83
LSM4-202ENST00000593564 ZNF707Q96C28 371 aaPredicted RBP26.46■■□□□ 1.83
LSM4-202ENST00000593564 PLXNA3P51805 1871 aa26.46■■□□□ 1.83
LSM4-202ENST00000593564 TGM5O43548 720 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 GFRA3O60609 400 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 RPA1P27694 616 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 GUCY1B3Q02153 619 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 TUSC3Q13454 348 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 POTEGQ6S5H5 508 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 PALB2Q86YC2 1186 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 RIN2Q8WYP3 895 aaPredicted RBP26.45■■□□□ 1.82
LSM4-202ENST00000593564 PDZD7Q9H5P4 517 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 ZDHHC7Q9NXF8 308 aa26.45■■□□□ 1.82
LSM4-202ENST00000593564 SF3B1O75533 1304 aaKnown RBP eCLIP26.44■■□□□ 1.82
LSM4-202ENST00000593564 N4BP3O15049 544 aa26.44■■□□□ 1.82
LSM4-202ENST00000593564 TADA2AO75478 443 aa26.44■■□□□ 1.82
LSM4-202ENST00000593564 OR52Z1P0C646 297 aa26.44■■□□□ 1.82
LSM4-202ENST00000593564 SPATA31D3P0C874 917 aa26.44■■□□□ 1.82
LSM4-202ENST00000593564 MYBP10242 640 aa26.44■■□□□ 1.82
LSM4-202ENST00000593564 CYP11B2P19099 503 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms