RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 WDR6Q9NNW5 1121 aaKnown RBP18.18■□□□□ 0.5
LIG1-205ENST00000593425 ANKEF1Q9NU02 776 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 PCDHA12Q9UN75 941 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 GIT1Q9Y2X7 761 aa18.18■□□□□ 0.5
LIG1-205ENST00000593425 MYO15AQ9UKN7 3530 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 SPATA31D3P0C874 917 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 AOC1P19801 751 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 RARRES1P49788 294 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 FUT10Q6P4F1 479 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 SPATA31D4Q6ZUB0 917 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 PIGOQ8TEQ8 1089 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 RSAD2Q8WXG1 361 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 WASF1Q92558 559 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 ZNF707Q96C28 371 aaPredicted RBP18.17■□□□□ 0.5
LIG1-205ENST00000593425 GPR62Q9BZJ7 368 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 TRIM6Q9C030 488 aaPredicted RBP18.17■□□□□ 0.5
LIG1-205ENST00000593425 POLR3FQ9H1D9 316 aaPredicted RBP18.17■□□□□ 0.5
LIG1-205ENST00000593425 TTC12Q9H892 705 aaPredicted RBP18.17■□□□□ 0.5
LIG1-205ENST00000593425 BRMS1Q9HCU9 246 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 CHST7Q9NS84 486 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 CLUHO75153 1309 aa18.17■□□□□ 0.5
LIG1-205ENST00000593425 DOCK8Q8NF50 2099 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 PRR23AA6NEV1 266 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 BTBD18B2RXH4 712 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 NPTXRO95502 500 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 GBP2P32456 591 aaPredicted RBP18.16■□□□□ 0.5
LIG1-205ENST00000593425 TXKP42681 527 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 FOSBP53539 338 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 NCBP1Q09161 790 aaKnown RBP18.16■□□□□ 0.5
LIG1-205ENST00000593425 ME3Q16798 604 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 PALB2Q86YC2 1186 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 GLYCTKQ8IVS8 523 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 RABGGTAQ92696 567 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 MYADMQ96S97 322 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 COLEC11Q9BWP8 271 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 NFKBIZQ9BYH8 718 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 RHOBTB2Q9BYZ6 727 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 GPRC5CQ9NQ84 441 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 KLK14Q9P0G3 267 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 IGSF9Q9P2J2 1179 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 CACNG4Q9UBN1 327 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 CACNA1HO95180 2353 aa18.16■□□□□ 0.5
LIG1-205ENST00000593425 POTEMA6NI47 508 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 USO1O60763 962 aaKnown RBP18.15■□□□□ 0.5
LIG1-205ENST00000593425 GRIK3Q13003 919 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 SLC27A1Q6PCB7 646 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 SIX5Q8N196 739 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 SMG7Q92540 1137 aaKnown RBP18.15■□□□□ 0.5
LIG1-205ENST00000593425 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 CCDC43Q96MW1 224 aaKnown RBP18.15■□□□□ 0.5
LIG1-205ENST00000593425 FBXL21Q9UKT6 434 aa18.15■□□□□ 0.5
LIG1-205ENST00000593425 A0A1B0GUA9 196 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 TGM5O43548 720 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 NEMFO60524 1076 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 NR1I2O75469 434 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 PAPLNO95428 1278 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 CFHP08603 1231 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 RPL17P18621 184 aaKnown RBP18.14■□□□□ 0.49
LIG1-205ENST00000593425 ANKRD1Q15327 319 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 POTEGQ6S5H5 508 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 CYP26C1Q6V0L0 522 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 MAEAQ7L5Y9 396 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 FRMD5Q7Z6J6 570 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 DIS3L2Q8IYB7 885 aaKnown RBP18.14■□□□□ 0.49
LIG1-205ENST00000593425 CCDC105Q8IYK2 499 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 NSUN7Q8NE18 718 aaKnown RBP18.14■□□□□ 0.49
LIG1-205ENST00000593425 RIN2Q8WYP3 895 aaPredicted RBP18.14■□□□□ 0.49
LIG1-205ENST00000593425 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 PAAF1Q9BRP4 392 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 EPS15L1Q9UBC2 864 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 PARP2Q9UGN5 583 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 DPP7Q9UHL4 492 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 ADAM28Q9UKQ2 775 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 ZMYM2Q9UBW7 1377 aa18.14■□□□□ 0.49
LIG1-205ENST00000593425 LRRIQ4A6NIV6 560 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 TTLL13PA6NNM8 815 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 JAK2O60674 1132 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 ANAPC15P60006 121 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 USP41Q3LFD5 358 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 LILRA6Q6PI73 481 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 PRSS55Q6UWB4 352 aaPredicted RBP18.13■□□□□ 0.49
LIG1-205ENST00000593425 HDAC7Q8WUI4 952 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 STAMQ92783 540 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 SNX27Q96L92 541 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 NT5C3AQ9H0P0 336 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 PLEKHA4Q9H4M7 779 aa18.13■□□□□ 0.49
LIG1-205ENST00000593425 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.13■□□□□ 0.49
LIG1-205ENST00000593425 KRBA1A5PL33 1030 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 SPATA31C1P0DKV0 1188 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 RTP2Q5QGT7 225 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 GET4Q7L5D6 327 aaPredicted RBP18.12■□□□□ 0.49
LIG1-205ENST00000593425 SLC44A3Q8N4M1 653 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 HASPINQ8TF76 798 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 RTP3Q9BQQ7 232 aa18.12■□□□□ 0.49
LIG1-205ENST00000593425 CXCL16Q9H2A7 254 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms