RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 ZSCAN5CA6NGD5 496 aaPredicted RBP17■□□□□ 0.31
MBD1-227ENST00000592060 BHMG1C9JSJ3 638 aaPredicted RBP17■□□□□ 0.31
MBD1-227ENST00000592060 ADM5C9JUS6 153 aa17■□□□□ 0.31
MBD1-227ENST00000592060 UBA1P22314 1058 aaKnown RBP17■□□□□ 0.31
MBD1-227ENST00000592060 MFAP3P55082 362 aa17■□□□□ 0.31
MBD1-227ENST00000592060 RHOT2Q8IXI1 618 aa17■□□□□ 0.31
MBD1-227ENST00000592060 PPM1KQ8N3J5 372 aa17■□□□□ 0.31
MBD1-227ENST00000592060 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
MBD1-227ENST00000592060 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
MBD1-227ENST00000592060 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
MBD1-227ENST00000592060 TTC7AQ9ULT0 858 aaPredicted RBP17■□□□□ 0.31
MBD1-227ENST00000592060 SOWAHBA6NEL2 793 aa17■□□□□ 0.31
MBD1-227ENST00000592060 DDNO94850 711 aaPredicted RBP17■□□□□ 0.31
MBD1-227ENST00000592060 CARSP49589 748 aaKnown RBP17■□□□□ 0.31
MBD1-227ENST00000592060 POLGP54098 1239 aaPredicted RBP17■□□□□ 0.31
MBD1-227ENST00000592060 GUCY2DQ02846 1103 aa17■□□□□ 0.31
MBD1-227ENST00000592060 SEPT14Q6ZU15 432 aa17■□□□□ 0.31
MBD1-227ENST00000592060 ASAP3Q8TDY4 903 aa17■□□□□ 0.31
MBD1-227ENST00000592060 CASKIN2Q8WXE0 1202 aa17■□□□□ 0.31
MBD1-227ENST00000592060 NT5C1BQ96P26 610 aa17■□□□□ 0.31
MBD1-227ENST00000592060 PORCNQ9H237 461 aa17■□□□□ 0.31
MBD1-227ENST00000592060 EPB41L5Q9HCM4 733 aa17■□□□□ 0.31
MBD1-227ENST00000592060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17■□□□□ 0.31
MBD1-227ENST00000592060 RAB20Q9NX57 234 aa17■□□□□ 0.31
MBD1-227ENST00000592060 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
MBD1-227ENST00000592060 CYP26A1O43174 497 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 RNF40O75150 1001 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 RTN2O75298 545 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 FTLP02792 175 aaPredicted RBP16.99■□□□□ 0.31
MBD1-227ENST00000592060 GGCXP38435 758 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 USP8P40818 1118 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 FMO1Q01740 532 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 PAK2Q13177 524 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 PRPF4BQ13523 1007 aaKnown RBP16.99■□□□□ 0.31
MBD1-227ENST00000592060 DCAF12L1Q5VU92 463 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 C15orf39Q6ZRI6 1047 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 USP37Q86T82 979 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 KLHL7Q8IXQ5 586 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 TSEN2Q8NCE0 465 aaKnown RBP16.99■□□□□ 0.31
MBD1-227ENST00000592060 BICD1Q96G01 975 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 PCYT2Q99447 389 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 NIFKQ9BYG3 293 aaKnown RBP16.99■□□□□ 0.31
MBD1-227ENST00000592060 SPATC1LQ9H0A9 340 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 CSADQ9Y600 493 aa16.99■□□□□ 0.31
MBD1-227ENST00000592060 A0A0G2JLL6 359 aaPredicted RBP16.98■□□□□ 0.31
MBD1-227ENST00000592060 GSTTP1A0A1W2PQM5 241 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 ESYT3A0FGR9 886 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 CCDC188H7C350 402 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 EXTL3O43909 919 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 FARP2O94887 1054 aaPredicted RBP16.98■□□□□ 0.31
MBD1-227ENST00000592060 PIGRP01833 764 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 GZMAP12544 262 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 GLRA2P23416 452 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 ARL2P36404 184 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 C11orf63Q6NUN7 778 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 PRRT2Q7Z6L0 340 aaPredicted RBP16.98■□□□□ 0.31
MBD1-227ENST00000592060 SLC47A2Q86VL8 602 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 TMEM143Q96AN5 459 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 FAM213AQ9BRX8 229 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 KCNG1Q9UIX4 513 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 FAM170AA1A519 330 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 IRF6O14896 467 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 CNMDO75829 334 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 MTA2O94776 668 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 CLSTN1O94985 981 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 SCP2P22307 547 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 NAMPTP43490 491 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 LIG4P49917 911 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 CLDN10P78369 228 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 TAF3Q5VWG9 929 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
MBD1-227ENST00000592060 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
MBD1-227ENST00000592060 AP1M1Q9BXS5 423 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 ACP6Q9NPH0 428 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 NFU1Q9UMS0 254 aa16.98■□□□□ 0.31
MBD1-227ENST00000592060 DIS3Q9Y2L1 958 aaKnown RBP16.98■□□□□ 0.31
MBD1-227ENST00000592060 GOLGA6BA6NDN3 693 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 ZNF233A6NK53 670 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 PHACTR2O75167 634 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 MMEP08473 750 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 DLATP10515 647 aaKnown RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 GPC5P78333 572 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 PSMD6Q15008 389 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 PSPC1Q8WXF1 523 aaKnown RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 DDX1Q92499 740 aaKnown RBP16.97■□□□□ 0.31
MBD1-227ENST00000592060 ZNF516Q92618 1163 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 TATDN2Q93075 761 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 PLEKHA4Q9H4M7 779 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 KIAA1586Q9HCI6 787 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 ZC3H11AO75152 810 aaKnown RBP eCLIP16.97■□□□□ 0.31
MBD1-227ENST00000592060 FAM153BP0C7A2 387 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 ITGA4P13612 1032 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 CYP11B1P15538 503 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 WNT7BP56706 349 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
MBD1-227ENST00000592060 FAM153CQ494X1 144 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms