RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PDLIM2Q96JY6 352 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 TNIP3Q96KP6 325 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 KIFC3Q9BVG8 833 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 FAM217BQ9NTX9 383 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 RBAKQ9NYW8 714 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 STOML1Q9UBI4 398 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 DNAJC12Q9UKB3 198 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 A0A087WWV3 80 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 TEDDM1Q5T9Z0 273 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 SRBD1Q8N5C6 995 aaKnown RBP14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 VPS33BQ9H267 617 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 IRAK4Q9NWZ3 460 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 POLLQ9UGP5 575 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 TBX3O15119 743 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 TADA2AO75478 443 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 CAP2P40123 477 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 TAF1BQ53T94 588 aaPredicted RBP14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 GLB1LQ6UWU2 654 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 ARRDC4Q8NCT1 418 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 VPS39Q96JC1 886 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 GJB4Q9NTQ9 266 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 ERAP1Q9NZ08 941 aa14.15□□□□□ -0.14
SMARCA4-216ENST00000591545 FAM187AA6NFU0 413 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 NEMP1O14524 444 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 TADA3O75528 432 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 CALB1P05937 261 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 RALAP11233 206 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 CYP2C9P11712 490 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 TAC1P20366 129 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 VAMP7P51809 220 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 KRT33BQ14525 404 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 TMEM270Q6UE05 265 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 NOP9Q86U38 636 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 FMR1NBQ8N0W7 255 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 ZKSCAN4Q969J2 545 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 PRMT6Q96LA8 375 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 ZDHHC15Q96MV8 337 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 MRPL46Q9H2W6 279 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 RRAGCQ9HB90 399 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 DCDC2CA8MYV0 355 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 CTIFO43310 598 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 PALMO75781 387 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 UPP2O95045 317 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 RFC5P40937 340 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 CASP2P42575 452 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 ADCY1Q08828 1119 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 ELAC2Q9BQ52 826 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 EDEM3Q9BZQ6 932 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 FNDC3AQ9Y2H6 1198 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 COPEO14579 308 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 PDIA5Q14554 519 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 MAML1Q92585 1016 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 ASNSD1Q9NWL6 643 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 TARSL2A2RTX5 802 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 HBP1O60381 514 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 LRRC23Q53EV4 343 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 TBC1D1Q86TI0 1168 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 MROH8Q9H579 483 aa14.14□□□□□ -0.15
SMARCA4-216ENST00000591545 UBE4BO95155 1302 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 CFAP73A6NFT4 308 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PDHBP11177 359 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 GPC5P78333 572 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PDCLQ13371 301 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PDIA6Q15084 440 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 TEX2Q8IWB9 1127 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 ZNF189O75820 626 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 DDNO94850 711 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 RAD51Q06609 339 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 TMCO4Q5TGY1 634 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 CFAP36Q96G28 342 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 A0A1W2PQC6 194 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 MANSC4A6NHS7 340 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 KPNA7A9QM74 516 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 RGL2O15211 777 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 NCF2P19878 526 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PTPN21Q16825 1174 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 TSGA10IPQ3SY00 556 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PDS5AQ29RF7 1337 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 ACSL3O95573 720 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 CHRNA3P32297 505 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 IL1RL1Q01638 556 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 NAALADL2Q58DX5 795 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 ICE2Q659A1 982 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 DDX50Q9BQ39 737 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 SAYSD1Q9NPB0 183 aa14.13□□□□□ -0.15
SMARCA4-216ENST00000591545 GMNCA6NCL1 334 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 TRPA1O75762 1119 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 PAMP19021 973 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 SDC4P31431 198 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 POLE2P56282 527 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 ENOSF1Q7L5Y1 443 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 LRRC43Q8N309 656 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 TSC22D3Q99576 134 aa14.12□□□□□ -0.15
SMARCA4-216ENST00000591545 AAASQ9NRG9 546 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms