RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 PTPRHQ9HD43 1115 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 SNTG2Q9NY99 539 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 PARP2Q9UGN5 583 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 HIDE1A8MVS5 230 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 PER2O15055 1255 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 PDIA4P13667 645 aaKnown RBP24.59■■□□□ 1.53
MBD3-208ENST00000590830 NRIP1P48552 1158 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 DSC1Q08554 894 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 ADAM15Q13444 863 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 STK38Q15208 465 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 AAK1Q2M2I8 961 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 LEXMQ3ZCV2 418 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 COLGALT2Q8IYK4 626 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 HACE1Q8IYU2 909 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.59■■□□□ 1.53
MBD3-208ENST00000590830 ZNF396Q96N95 335 aaPredicted RBP24.59■■□□□ 1.53
MBD3-208ENST00000590830 TCF25Q9BQ70 676 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 CLDND1Q9NY35 253 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 TNFSF13BQ9Y275 285 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 PHLPP2Q6ZVD8 1323 aa24.59■■□□□ 1.53
MBD3-208ENST00000590830 A0A087X0B3 334 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 H3BQ06 376 aaPredicted RBP24.58■■□□□ 1.53
MBD3-208ENST00000590830 NRP1O14786 923 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 SPTLC2O15270 562 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 NCK2O43639 380 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 ALDH2P05091 517 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 PLPP4Q5VZY2 271 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 PDE12Q6L8Q7 609 aaKnown RBP24.58■■□□□ 1.53
MBD3-208ENST00000590830 LARP4BQ92615 738 aaKnown RBP24.58■■□□□ 1.53
MBD3-208ENST00000590830 TMEM175Q9BSA9 504 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 TARS2Q9BW92 718 aaKnown RBP24.58■■□□□ 1.53
MBD3-208ENST00000590830 PANK2Q9BZ23 570 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 ODF2LQ9ULJ1 636 aa24.58■■□□□ 1.53
MBD3-208ENST00000590830 ABLIM1O14639 778 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 MAPTP10636 758 aaKnown RBP24.57■■□□□ 1.52
MBD3-208ENST00000590830 ZNF131P52739 623 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 RRAGBQ5VZM2 374 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 EP400NLQ6ZTU2 488 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 TMEM169Q96HH4 297 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 FAM193BQ96PV7 902 aaPredicted RBP24.57■■□□□ 1.52
MBD3-208ENST00000590830 TLE6Q9H808 572 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 CCDC39Q9UFE4 941 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 FAN1Q9Y2M0 1017 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 ZDHHC9Q9Y397 364 aa24.57■■□□□ 1.52
MBD3-208ENST00000590830 PPP6R2O75170 966 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 RECQL4O94761 1208 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 RBM10P98175 930 aaKnown RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 TMC7Q7Z402 723 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 DDX53Q86TM3 631 aaKnown RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 EFHBQ8N7U6 833 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 MRPL43Q8N983 215 aaKnown RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 VN1R2Q8NFZ6 395 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 ADAMTS19Q8TE59 1207 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 ZBTB45Q96K62 511 aaPredicted RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 NECAB3Q96P71 396 aaPredicted RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 ADPGKQ9BRR6 497 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 MRPL4Q9BYD3 311 aaKnown RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 CDT1Q9H211 546 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 NGRNQ9NPE2 291 aaKnown RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 ENTPD7Q9NQZ7 604 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 MARCH5Q9NX47 278 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 DAXXQ9UER7 740 aaPredicted RBP24.56■■□□□ 1.52
MBD3-208ENST00000590830 KCNG1Q9UIX4 513 aa24.56■■□□□ 1.52
MBD3-208ENST00000590830 F8W810 466 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 PTGESO14684 152 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 TBX10O75333 385 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 YEATS4O95619 227 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 GLP2RO95838 553 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 PROZP22891 400 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 SMTNP53814 917 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 NCKAP1LP55160 1127 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 DUSP6Q16828 381 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 DCAF4L1Q3SXM0 396 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 VPS52Q8N1B4 723 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 CEP120Q8N960 986 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 AUTS2Q8WXX7 1259 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 FIZ1Q96SL8 496 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 CLEC1BQ9P126 229 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 LARSQ9P2J5 1176 aaKnown RBP24.55■■□□□ 1.52
MBD3-208ENST00000590830 STK17AQ9UEE5 414 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 GDAQ9Y2T3 454 aa24.55■■□□□ 1.52
MBD3-208ENST00000590830 ZMYM2Q9UBW7 1377 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 TTC28Q96AY4 2481 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 C2orf71A6NGG8 1288 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 CXCL14O95715 111 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 OR1G1P47890 313 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 HAUS6Q7Z4H7 955 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 MYCT1Q8N699 235 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 KCNN1Q92952 543 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 PPP2R3CQ969Q6 453 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 ZBP1Q9H171 429 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 PARVGQ9HBI0 331 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 CACNG4Q9UBN1 327 aa24.54■■□□□ 1.52
MBD3-208ENST00000590830 PRG3Q9Y2Y8 225 aaPredicted RBP24.54■■□□□ 1.52
MBD3-208ENST00000590830 CUL9Q8IWT3 2517 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 CARNS1A5YM72 827 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 MYMKA6NI61 221 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 FAM13AO94988 1023 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 EFEMP2O95967 443 aa24.53■■□□□ 1.52
MBD3-208ENST00000590830 KRT18P05783 430 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms