RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 FOXR1Q6PIV2 292 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 ADCK1Q86TW2 530 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 C4orf33Q8N1A6 199 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 STK33Q9BYT3 514 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 RGL1Q9NZL6 768 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 CYP2D7A0A087X1C5 515 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 PP2D1A8MPX8 630 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 GCLMP48507 274 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 IGBP1P78318 339 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 TMCO5AQ8N6Q1 288 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 RXFP1Q9HBX9 757 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 SYNJ2BP-COX16A0A087WUM0 186 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 PI4K2BG5E9Z4 385 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 PAMP19021 973 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 SLFN12LQ6IEE8 588 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 MANSC1Q9H8J5 431 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 COX16Q9P0S2 106 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 BLOC1S6Q9UL45 172 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 CLTCL1P53675 1640 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 VAMP7P51809 220 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 EPHA10Q5JZY3 1008 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 HACE1Q8IYU2 909 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 CATSPER2Q96P56 530 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 C11orf70Q9BRQ4 267 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 GGA2Q9UJY4 613 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 GOLGA8IPA6NC78 632 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 GOLGA8JA6NMD2 632 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 TMEM253P0C7T8 217 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 YWHAHQ04917 246 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 FAM160B1Q5W0V3 765 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC7A3Q8WY07 619 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 BARHL2Q9NY43 387 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 SEPT9Q9UHD8 586 aaPredicted RBP15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 ZHX2Q9Y6X8 837 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.07
SMARCA4-214ENST00000589677 SKAP2O75563 359 aaPredicted RBP15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 LDHAP00338 332 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 SERPINB1P30740 379 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 CTTNQ14247 550 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 MDH1BQ5I0G3 518 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 RHPN2Q8IUC4 686 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 FUKQ8N0W3 1084 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 PHF20Q9BVI0 1012 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 PHTF1Q9UMS5 762 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 PLAGL2Q9UPG8 496 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 NEU2Q9Y3R4 380 aa15.46■□□□□ 0.06
SMARCA4-214ENST00000589677 SRRM3A6NNA2 597 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 IGKV5-2P06315 115 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 CACNA2D1P54289 1103 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 ROR1Q01973 937 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 LVRNQ6Q4G3 990 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 CLMNQ96JQ2 1002 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 CEP170P1Q96L14 293 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 FAM192AQ9GZU8 254 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 SMAPO00193 183 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 UBOX5O94941 541 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 TAP1Q03518 808 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 GRM4Q14833 912 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 TRIM16LQ309B1 348 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 P3H1Q32P28 736 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 LRRN4CLQ8ND94 238 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 NCLNQ969V3 563 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 MTRQ99707 1265 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 CELF4Q9BZC1 486 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 KANSL2Q9H9L4 492 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 LRCH1Q9Y2L9 728 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 DTNAQ9Y4J8 743 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 AP4S1Q9Y587 144 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 CD58P19256 250 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 KLRC1P26715 233 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 PDIA5Q14554 519 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 ABCB5Q2M3G0 1257 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 BBS5Q8N3I7 341 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 RBBP8NLQ8NC74 664 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 C9orf72Q96LT7 481 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 HAO1Q9UJM8 370 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 USP17L3A6NCW0 530 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 USP17L4A6NCW7 530 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 SEC24DO94855 1032 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 UCHL3P15374 230 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 TYK2P29597 1187 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 SLC16A2P36021 539 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 MAGEA4P43358 317 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 NLRP11P59045 1033 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 USP17L1Q7RTZ2 530 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 SETD3Q86TU7 594 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 METTL13Q8N6R0 699 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 PRPF38AQ8NAV1 312 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 OR9Q1Q8NGQ5 310 aa15.45■□□□□ 0.06
SMARCA4-214ENST00000589677 KCNB2Q92953 911 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms