RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 COASYQ13057 564 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 SMAD4Q13485 552 aaKnown RBP21.17■□□□□ 0.98
CIRBP-221ENST00000589161 CLUL1Q15846 466 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 COLGALT2Q8IYK4 626 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 MSLNLQ96KJ4 702 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 NTPCRQ9BSD7 190 aaKnown RBP21.17■□□□□ 0.98
CIRBP-221ENST00000589161 ZBP1Q9H171 429 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 MIOSQ9NXC5 875 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 ATG2AQ2TAZ0 1938 aa21.17■□□□□ 0.98
CIRBP-221ENST00000589161 MBTPS2O43462 519 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 GLP2RO95838 553 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 CTSAP10619 480 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 CA8P35219 290 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 DSC1Q08554 894 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 MAPK7Q13164 816 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 PTPAQ15257 358 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 DCAF4L1Q3SXM0 396 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 NT5DC1Q5TFE4 455 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 ATF7IP2Q5U623 682 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 TMEM184AQ6ZMB5 413 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 TMEM87AQ8NBN3 555 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 RASSF8Q8NHQ8 419 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 BCL7CQ8WUZ0 217 aaPredicted RBP21.16■□□□□ 0.98
CIRBP-221ENST00000589161 RPS6KC1Q96S38 1066 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 ARHGAP28Q9P2N2 729 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 PRKAG3Q9UGI9 489 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 IRAK3Q9Y616 596 aa21.16■□□□□ 0.98
CIRBP-221ENST00000589161 SFI1A8K8P3 1242 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
CIRBP-221ENST00000589161 PLS3P13797 630 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 OR1G1P47890 313 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 SMTNP53814 917 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 GRIN1Q05586 938 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 RAD51AP2Q09MP3 1159 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 GRIK3Q13003 919 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 SMAD2Q15796 467 aaKnown RBP21.15■□□□□ 0.98
CIRBP-221ENST00000589161 GSTCDQ8NEC7 633 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 SPIRE2Q8WWL2 714 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 CCSER1Q9C0I3 900 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 SNTG2Q9NY99 539 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 KLK14Q9P0G3 267 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 BARX2Q9UMQ3 279 aaPredicted RBP21.15■□□□□ 0.98
CIRBP-221ENST00000589161 TNFSF13BQ9Y275 285 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 USP20Q9Y2K6 914 aa21.15■□□□□ 0.98
CIRBP-221ENST00000589161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.14■□□□□ 0.97
CIRBP-221ENST00000589161 EDN1P05305 212 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 HSP90AA1P07900 732 aaKnown RBP21.14■□□□□ 0.97
CIRBP-221ENST00000589161 KCNC3Q14003 757 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 EEF1DP3Q658K8 133 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 FAM173BQ6P4H8 233 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 SMRP1Q8NCR6 262 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 VN1R2Q8NFZ6 395 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 COLEC11Q9BWP8 271 aa21.14■□□□□ 0.97
CIRBP-221ENST00000589161 MRPL4Q9BYD3 311 aaKnown RBP21.14■□□□□ 0.97
CIRBP-221ENST00000589161 PRG3Q9Y2Y8 225 aaPredicted RBP21.14■□□□□ 0.97
CIRBP-221ENST00000589161 SRPRBQ9Y5M8 271 aaKnown RBP21.14■□□□□ 0.97
CIRBP-221ENST00000589161 SLC16A4O15374 487 aa21.13■□□□□ 0.97
CIRBP-221ENST00000589161 MARCKSP29966 332 aaPredicted RBP21.13■□□□□ 0.97
CIRBP-221ENST00000589161 CEBPZQ03701 1054 aaKnown RBP21.13■□□□□ 0.97
CIRBP-221ENST00000589161 KARSQ15046 597 aaKnown RBP21.13■□□□□ 0.97
CIRBP-221ENST00000589161 ARSHQ5FYA8 562 aa21.13■□□□□ 0.97
CIRBP-221ENST00000589161 GJD3Q8N144 294 aa21.13■□□□□ 0.97
CIRBP-221ENST00000589161 CASP10Q92851 521 aa21.13■□□□□ 0.97
CIRBP-221ENST00000589161 ACO2Q99798 780 aaKnown RBP21.13■□□□□ 0.97
CIRBP-221ENST00000589161 VN1R3Q9BXE9 311 aa21.13■□□□□ 0.97
CIRBP-221ENST00000589161 LARSQ9P2J5 1176 aaKnown RBP21.13■□□□□ 0.97
CIRBP-221ENST00000589161 ODF2LQ9ULJ1 636 aa21.13■□□□□ 0.97
CIRBP-221ENST00000589161 NCOR1O75376 2440 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 H0YCG3 227 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 CLASP2O75122 1294 aaKnown RBP21.12■□□□□ 0.97
CIRBP-221ENST00000589161 RECQL4O94761 1208 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 HOXB8P17481 243 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-221ENST00000589161 PLCG1P19174 1290 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 SSTR3P32745 418 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-221ENST00000589161 RBM10P98175 930 aaKnown RBP21.12■□□□□ 0.97
CIRBP-221ENST00000589161 STRN3Q13033 797 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 LLGL2Q6P1M3 1020 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 GPBP1Q86WP2 473 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 ADHFE1Q8IWW8 467 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 AUTS2Q8WXX7 1259 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 RAD54LQ92698 747 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 BLOC1S4Q9NUP1 217 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 MARCH5Q9NX47 278 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 CCDC39Q9UFE4 941 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 FBXO2Q9UK22 296 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-221ENST00000589161 SSX2IPQ9Y2D8 614 aa21.12■□□□□ 0.97
CIRBP-221ENST00000589161 MORC2Q9Y6X9 1032 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-221ENST00000589161 NPHP3-ACAD11A0A0J9YXS1 232 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 SOD2P04179 222 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 THP07101 528 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 DDIT3P35638 169 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 DHX8Q14562 1220 aaKnown RBP21.11■□□□□ 0.97
CIRBP-221ENST00000589161 SLC39A14Q15043 492 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 ANKRD54Q6NXT1 300 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 TAS1R3Q7RTX0 852 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 TMEM161BQ8NDZ6 487 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 EPSTI1Q96J88 318 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 POP1Q99575 1024 aaKnown RBP21.11■□□□□ 0.97
CIRBP-221ENST00000589161 EMILIN2Q9BXX0 1053 aa21.11■□□□□ 0.97
CIRBP-221ENST00000589161 PTPRHQ9HD43 1115 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms