RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 P4HA2O15460 535 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 ADRB2P07550 413 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 SFPQP23246 707 aaKnown RBP eCLIP33.76■■■■□ 3
CAPNS1-206ENST00000588815 AXLP30530 894 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 CTCFP49711 727 aaPredicted RBP33.76■■■■□ 3
CAPNS1-206ENST00000588815 MRPS6P82932 125 aaKnown RBP33.76■■■■□ 3
CAPNS1-206ENST00000588815 CYP24A1Q07973 514 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 TMEM62Q0P6H9 643 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 PTK7Q13308 1070 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 KYAT1Q16773 422 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 APBB1IPQ7Z5R6 666 aaPredicted RBP33.76■■■■□ 3
CAPNS1-206ENST00000588815 OSMRQ99650 979 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 FAM213AQ9BRX8 229 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 SIK3Q9Y2K2 1263 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 USP20Q9Y2K6 914 aa33.76■■■■□ 3
CAPNS1-206ENST00000588815 PMM2O15305 246 aa33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 POU5F1Q01860 360 aaKnown RBP33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 MTFR1Q15390 333 aa33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 ZNF568Q3ZCX4 644 aa33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 ZSWIM2Q8NEG5 633 aa33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 PARD3BQ8TEW8 1205 aa33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 DEFB118Q96PH6 123 aa33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 CELF4Q9BZC1 486 aaKnown RBP33.76■■■□□ 2.99
CAPNS1-206ENST00000588815 B4GALT5O43286 388 aa33.75■■■□□ 2.99
CAPNS1-206ENST00000588815 TSPAN1O60635 241 aa33.75■■■□□ 2.99
CAPNS1-206ENST00000588815 ARF4P18085 180 aaPredicted RBP33.75■■■□□ 2.99
CAPNS1-206ENST00000588815 FMO5P49326 533 aa33.75■■■□□ 2.99
CAPNS1-206ENST00000588815 SNX17Q15036 470 aa33.75■■■□□ 2.99
CAPNS1-206ENST00000588815 TRPV2Q9Y5S1 764 aa33.75■■■□□ 2.99
CAPNS1-206ENST00000588815 A0A1B0GUA9 196 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 CAND2O75155 1236 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 MCF2P10911 925 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 GTF2H1P32780 548 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 PTPN21Q16825 1174 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 CNGA4Q8IV77 575 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 PCMTD1Q96MG8 357 aaPredicted RBP33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 ADPGKQ9BRR6 497 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 GINS2Q9Y248 185 aa33.74■■■□□ 2.99
CAPNS1-206ENST00000588815 TRIM21P19474 475 aaKnown RBP33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 CETN1Q12798 172 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 PSMD6Q15008 389 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 CRELD2Q6UXH1 353 aaPredicted RBP33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 GBP6Q6ZN66 633 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 CATSPER4Q7RTX7 472 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 EDEM3Q9BZQ6 932 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 NOD1Q9Y239 953 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 RALGAPA2Q2PPJ7 1873 aa33.73■■■□□ 2.99
CAPNS1-206ENST00000588815 FAM189A1O60320 539 aa33.72■■■□□ 2.99
CAPNS1-206ENST00000588815 SURF1Q15526 300 aa33.72■■■□□ 2.99
CAPNS1-206ENST00000588815 LRRC8AQ8IWT6 810 aa33.72■■■□□ 2.99
CAPNS1-206ENST00000588815 PDZD7Q9H5P4 517 aa33.72■■■□□ 2.99
CAPNS1-206ENST00000588815 CDHR5Q9HBB8 845 aa33.72■■■□□ 2.99
CAPNS1-206ENST00000588815 A0A1W2PQJ5 194 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 AKR1B15C9JRZ8 316 aaPredicted RBP33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 ARVCFO00192 962 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 CSDE1O75534 798 aaKnown RBP33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 GYPCP04921 128 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 CLDN10P78369 228 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 KCNMA1Q12791 1236 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 EXOC3L4Q17RC7 722 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 ARMC5Q96C12 935 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 CCDC51Q96ER9 411 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 ZNF333Q96JL9 665 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 CDT1Q9H211 546 aa33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 RBAKQ9NYW8 714 aaPredicted RBP33.71■■■□□ 2.99
CAPNS1-206ENST00000588815 NRDCO43847 1150 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 ACOT2P49753 483 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 RBL2Q08999 1139 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 DCAF4L1Q3SXM0 396 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 ZBTB33Q86T24 672 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 BRSK2Q8IWQ3 736 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 NEK11Q8NG66 645 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 TTYH3Q9C0H2 523 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 MMRN2Q9H8L6 949 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 PLCB1Q9NQ66 1216 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 CPSF3Q9UKF6 684 aaKnown RBP33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 CAPN11Q9UMQ6 739 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 CDY2AQ9Y6F7 541 aa33.7■■■□□ 2.99
CAPNS1-206ENST00000588815 TRIM49P0CI25 452 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 TRIM49CP0CI26 452 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 LBX1P52954 281 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 EEF1DP3Q658K8 133 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 NOTUMQ6P988 496 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 PLEKHO2Q8TD55 490 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 FNBP1Q96RU3 617 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 AGPAT5Q9NUQ2 364 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 DAAM1Q9Y4D1 1078 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 CEP350Q5VT06 3117 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 HSPA1AP0DMV8 641 aaKnown RBP33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 HSPA1BP0DMV9 641 aaKnown RBP33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 DLG4P78352 724 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 C1orf220Q5T0J3 134 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 CCDC155Q8N6L0 562 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 CRISPLD2Q9H0B8 497 aa33.69■■■□□ 2.98
CAPNS1-206ENST00000588815 TRIP11Q15643 1979 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 LRRIQ3A6PVS8 624 aaPredicted RBP33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 MFAP3LO75121 409 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 HARSP12081 509 aaKnown RBP33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 CAPN2P17655 700 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 CASP14P31944 242 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms