RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 NRIP1P48552 1158 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 SCNN1GP51170 649 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 DLX2Q07687 328 aaPredicted RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 GRIK3Q13003 919 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 COASYQ13057 564 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 GIT2Q14161 759 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 SMC1AQ14683 1233 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 KARSQ15046 597 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 ZRSR1Q15695 479 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 ATF7IP2Q5U623 682 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 MRPL43Q8N983 215 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 LINC00301Q8NCQ3 95 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 TMEM161BQ8NDZ6 487 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 RAD54LQ92698 747 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 ACO2Q99798 780 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 TLE6Q9H808 572 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 POLD4Q9HCU8 107 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 ENTPD7Q9NQZ7 604 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 MIOSQ9NXC5 875 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 LARSQ9P2J5 1176 aaKnown RBP11.55□□□□□ -0.56
TPM4-209ENST00000588483 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
TPM4-209ENST00000588483 C2orf71A6NGG8 1288 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 CCDC169A6NNP5 214 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 HIDE1A8MVS5 230 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 NT5C1B-RDH14C9J2C7 533 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 H0YCG3 227 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 H3BQ06 376 aaPredicted RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 NRP1O14786 923 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 LINC01565O15544 149 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 ALDH2P05091 517 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 AKAP5P24588 427 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 MARCKSP29966 332 aaPredicted RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 DDIT3P35638 169 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 SMTNP53814 917 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 NCKAP1LP55160 1127 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 SMAD4Q13485 552 aaKnown RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 NAB2Q15742 525 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 PLPP4Q5VZY2 271 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 EEF1DP3Q658K8 133 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 PTCRAQ6ISU1 281 aaPredicted RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 TMC7Q7Z402 723 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 APBB1IPQ7Z5R6 666 aaPredicted RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 GPR65Q8IYL9 337 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 VPS52Q8N1B4 723 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 SMRP1Q8NCR6 262 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 MICAL1Q8TDZ2 1067 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 EPSTI1Q96J88 318 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 FAM193BQ96PV7 902 aaPredicted RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 PLIN2Q99541 437 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 REEP2Q9BRK0 252 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
TPM4-209ENST00000588483 MARCH5Q9NX47 278 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 PRKAG3Q9UGI9 489 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 FAM50BQ9Y247 325 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 TRIP11Q15643 1979 aa11.54□□□□□ -0.56
TPM4-209ENST00000588483 PTGESO14684 152 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 SLC16A4O15374 487 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 LILRB3O75022 631 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 PPP6R2O75170 966 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 RECQL4O94761 1208 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 YEATS4O95619 227 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 SOD2P04179 222 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM4-209ENST00000588483 ZSCAN22P10073 491 aaPredicted RBP11.53□□□□□ -0.56
TPM4-209ENST00000588483 MAPTP10636 758 aaKnown RBP11.53□□□□□ -0.56
TPM4-209ENST00000588483 GRM5P41594 1212 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 TUSC3Q13454 348 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 MCM6Q14566 821 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 BMS1Q14692 1282 aaKnown RBP11.53□□□□□ -0.56
TPM4-209ENST00000588483 XKR4Q5GH76 650 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 ZPBP2Q6X784 338 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 GPBP1Q86WP2 473 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 FAM178BQ8IXR5 827 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 CLIC6Q96NY7 704 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 GBP3Q9H0R5 595 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 PARVGQ9HBI0 331 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 SNTG2Q9NY99 539 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 CCDC39Q9UFE4 941 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 PARP2Q9UGN5 583 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 CD207Q9UJ71 328 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 CITO14578 2027 aa11.53□□□□□ -0.56
TPM4-209ENST00000588483 NPHP3-ACAD11A0A0J9YXS1 232 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 SFI1A8K8P3 1242 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 PER2O15055 1255 aa11.52□□□□□ -0.57
TPM4-209ENST00000588483 MBTPS2O43462 519 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms