RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ARF4P18085 180 aaPredicted RBP15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 CYP4A11Q02928 519 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 POU5F1BQ06416 359 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 CTTNQ14247 550 aaKnown RBP15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 PCBP1Q15365 356 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 NOTUMQ6P988 496 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 SPATA31D4Q6ZUB0 917 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 GPR65Q8IYL9 337 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 GPR152Q8TDT2 470 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 HDAC7Q8WUI4 952 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 SMG7Q92540 1137 aaKnown RBP15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 FAM193BQ96PV7 902 aaPredicted RBP15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 NT5C3AQ9H0P0 336 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 TBC1D17Q9HA65 648 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 ZDHHC7Q9NXF8 308 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 CACNG4Q9UBN1 327 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 STK36Q9NRP7 1315 aa15.38■□□□□ 0.05
CLPTM1-208ENST00000588274 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 WNT7AO00755 349 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 SLITRK3O94933 977 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 LYPLA2O95372 231 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 LAMP2P13473 410 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 RPL17P18621 184 aaKnown RBP15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 AXLP30530 894 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 GBP2P32456 591 aaPredicted RBP15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 ARL2P36404 184 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 ID4P47928 161 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 SCRN1Q12765 414 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 RTP2Q5QGT7 225 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 PHLDB3Q6NSJ2 640 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 FUT10Q6P4F1 479 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 EXOC8Q8IYI6 725 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 MAML2Q8IZL2 1156 aaPredicted RBP15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 TCP11Q8WWU5 503 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 MTRQ99707 1265 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 HSD17B14Q9BPX1 270 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 PAAF1Q9BRP4 392 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 NFKBIZQ9BYH8 718 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 SLC2A4RGQ9NR83 387 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 FNIP2Q9P278 1114 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 CA14Q9ULX7 337 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 SSX2IPQ9Y2D8 614 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 CEP250Q9BV73 2442 aa15.37■□□□□ 0.05
CLPTM1-208ENST00000588274 DOCK6Q96HP0 2047 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 PATJQ8NI35 1801 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 NCOR2Q9Y618 2525 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 POTEMA6NI47 508 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 ASAP2O43150 1006 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 DKC1O60832 514 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 ERLIN2O94905 339 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 GLRA2P23416 452 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 AKAP5P24588 427 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 STK3Q13188 491 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 XKR9Q5GH70 373 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 NCAPH2Q6IBW4 605 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 PIK3AP1Q6ZUJ8 805 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 ST13P5Q8NFI4 369 aaPredicted RBP15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 RABGGTAQ92696 567 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 STAMQ92783 540 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 NXPE3Q969Y0 559 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 RMDN1Q96DB5 314 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 RPP25Q9BUL9 199 aaKnown RBP15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 PRKD2Q9BZL6 878 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 TM6SF1Q9BZW5 370 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 CXCL16Q9H2A7 254 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 PLEKHA4Q9H4M7 779 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 ZSWIM4Q9H7M6 989 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 ARHGEF3Q9NR81 526 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 FBXW11Q9UKB1 542 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 ADAM28Q9UKQ2 775 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 GIT1Q9Y2X7 761 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 NUMBLQ9Y6R0 609 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 R4GN57 208 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 VWA8A3KMH1 1905 aa15.36■□□□□ 0.05
CLPTM1-208ENST00000588274 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 CPLX1O14810 134 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 EPB41L2O43491 1005 aaKnown RBP15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 CCNT1O60563 726 aaKnown RBP15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 ZMYND10O75800 440 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 MXD4Q14582 209 aaPredicted RBP15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 NAB2Q15742 525 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 GET4Q7L5D6 327 aaPredicted RBP15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 CDR2LQ86X02 465 aaPredicted RBP15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 PALB2Q86YC2 1186 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 RIN2Q8WYP3 895 aaPredicted RBP15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 FGF14Q92915 247 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 APOL6Q9BWW8 343 aa15.35■□□□□ 0.05
CLPTM1-208ENST00000588274 NOTCH4Q99466 2003 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 A0A1B0GUA9 196 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 CCDC194A0A1B0GVG4 234 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 PTGESO14684 152 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 LRRN2O75325 713 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 REC8O95072 547 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 LMNAP02545 664 aaKnown RBP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 DCNP07585 359 aaKnown RBP15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 RARRES1P49788 294 aa15.34■□□□□ 0.05
CLPTM1-208ENST00000588274 GRIK3Q13003 919 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms