RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 CSRNP2Q9H175 543 aa18.19■□□□□ 0.5
NPC1-205ENST00000587163 ZSWIM4Q9H7M6 989 aa18.19■□□□□ 0.5
NPC1-205ENST00000587163 DPP7Q9UHL4 492 aa18.19■□□□□ 0.5
NPC1-205ENST00000587163 DOCK8Q8NF50 2099 aa18.19■□□□□ 0.5
NPC1-205ENST00000587163 ZNF292O60281 2723 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 TDRD15B5MCY1 1934 aaKnown RBP18.18■□□□□ 0.5
NPC1-205ENST00000587163 FAM205CA6NFA0 338 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 INO80B-WBP1J3KQ70 363 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 TBX3O15119 743 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 TGM5O43548 720 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 SLITRK3O94933 977 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 RPL17P18621 184 aaKnown RBP18.18■□□□□ 0.5
NPC1-205ENST00000587163 AKAP5P24588 427 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 ID4P47928 161 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 MBTD1Q05BQ5 628 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 LILRA6Q6PI73 481 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
NPC1-205ENST00000587163 CDR2LQ86X02 465 aaPredicted RBP18.18■□□□□ 0.5
NPC1-205ENST00000587163 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
NPC1-205ENST00000587163 GLYCTKQ8IVS8 523 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 TPH2Q8IWU9 490 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 ASAP3Q8TDY4 903 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 STAMQ92783 540 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 COLEC11Q9BWP8 271 aa18.18■□□□□ 0.5
NPC1-205ENST00000587163 NXF3Q9H4D5 531 aaKnown RBP18.18■□□□□ 0.5
NPC1-205ENST00000587163 B4GALT5O43286 388 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 MARCH6O60337 910 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 SRFP11831 508 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 LAMP2P13473 410 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 ARF4P18085 180 aaPredicted RBP18.17■□□□□ 0.5
NPC1-205ENST00000587163 CAPSQ13938 189 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 MXD4Q14582 209 aaPredicted RBP18.17■□□□□ 0.5
NPC1-205ENST00000587163 PCBP1Q15365 356 aaKnown RBP eCLIP18.17■□□□□ 0.5
NPC1-205ENST00000587163 ELMSAN1Q6PJG2 1045 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 GPR152Q8TDT2 470 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 HDAC7Q8WUI4 952 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 RIN2Q8WYP3 895 aaPredicted RBP18.17■□□□□ 0.5
NPC1-205ENST00000587163 CCDC51Q96ER9 411 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 PLEKHA4Q9H4M7 779 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 TBC1D17Q9HA65 648 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 PIDD1Q9HB75 910 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 CACNG4Q9UBN1 327 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
NPC1-205ENST00000587163 MTCL1Q9Y4B5 1905 aaKnown RBP18.17■□□□□ 0.5
NPC1-205ENST00000587163 DCNP07585 359 aaKnown RBP18.16■□□□□ 0.5
NPC1-205ENST00000587163 ARL2P36404 184 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 POU5F1BQ06416 359 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 NCBP1Q09161 790 aaKnown RBP18.16■□□□□ 0.5
NPC1-205ENST00000587163 SCRN1Q12765 414 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 FUT10Q6P4F1 479 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 NXPE3Q969Y0 559 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 PRKD2Q9BZL6 878 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 TM6SF1Q9BZW5 370 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 KLK14Q9P0G3 267 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 FNIP2Q9P278 1114 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 ADAM28Q9UKQ2 775 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 R4GN57 208 aa18.16■□□□□ 0.5
NPC1-205ENST00000587163 A0A087WWV3 80 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 ANHXE9PGG2 379 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 NR1I2O75469 434 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 C1RP00736 705 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 GLRA2P23416 452 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 HTR4Q13639 388 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 TFDP1Q14186 410 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 USP41Q3LFD5 358 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 SPECC1Q5M775 1068 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 PRSS55Q6UWB4 352 aaPredicted RBP18.15■□□□□ 0.5
NPC1-205ENST00000587163 GET4Q7L5D6 327 aaPredicted RBP18.15■□□□□ 0.5
NPC1-205ENST00000587163 ERMP1Q7Z2K6 904 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 HSD17B14Q9BPX1 270 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 EIF2AK1Q9BQI3 630 aaKnown RBP18.15■□□□□ 0.5
NPC1-205ENST00000587163 PAAF1Q9BRP4 392 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 RPP25Q9BUL9 199 aaKnown RBP18.15■□□□□ 0.5
NPC1-205ENST00000587163 TRIM6Q9C030 488 aaPredicted RBP18.15■□□□□ 0.5
NPC1-205ENST00000587163 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 ZDHHC7Q9NXF8 308 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.15■□□□□ 0.5
NPC1-205ENST00000587163 DLGAP2Q9P1A6 1054 aa18.15■□□□□ 0.5
NPC1-205ENST00000587163 NPTXRO95502 500 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 RFX1P22670 979 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 PHLDB3Q6NSJ2 640 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 SLFN12Q8IYM2 578 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 KCNG4Q8TDN1 519 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 NAP1L4Q99733 375 aaKnown RBP18.14■□□□□ 0.49
NPC1-205ENST00000587163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.14■□□□□ 0.49
NPC1-205ENST00000587163 NUMBLQ9Y6R0 609 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 DOCK6Q96HP0 2047 aa18.14■□□□□ 0.49
NPC1-205ENST00000587163 EP300Q09472 2414 aaPredicted RBP18.14■□□□□ 0.49
NPC1-205ENST00000587163 A0A1B0GUA9 196 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 TADA2AO75478 443 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 ZMYND10O75800 440 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 LYPLA2O95372 231 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 BAG4O95429 457 aaKnown RBP18.13■□□□□ 0.49
NPC1-205ENST00000587163 CTDNEP1O95476 244 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 LMNAP02545 664 aaKnown RBP18.13■□□□□ 0.49
NPC1-205ENST00000587163 NR5A1Q13285 461 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 RTP2Q5QGT7 225 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 SLC27A1Q6PCB7 646 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 GPR65Q8IYL9 337 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 NFKBIZQ9BYH8 718 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms