RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 POP1Q99575 1024 aaKnown RBP22.7■■□□□ 1.22
CIRBP-209ENST00000586555 CDCA3Q99618 268 aaPredicted RBP22.7■■□□□ 1.22
CIRBP-209ENST00000586555 APOL6Q9BWW8 343 aa22.7■■□□□ 1.22
CIRBP-209ENST00000586555 GBP3Q9H0R5 595 aa22.7■■□□□ 1.22
CIRBP-209ENST00000586555 TMEM134Q9H6X4 195 aa22.7■■□□□ 1.22
CIRBP-209ENST00000586555 NRDE2Q9H7Z3 1164 aa22.7■■□□□ 1.22
CIRBP-209ENST00000586555 NGRNQ9NPE2 291 aaKnown RBP22.7■■□□□ 1.22
CIRBP-209ENST00000586555 LARSQ9P2J5 1176 aaKnown RBP22.7■■□□□ 1.22
CIRBP-209ENST00000586555 FBXO2Q9UK22 296 aaPredicted RBP22.7■■□□□ 1.22
CIRBP-209ENST00000586555 TRIOO75962 3097 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 ARL5CA6NH57 179 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 NR1I2O75469 434 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 PBX3P40426 434 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 GRIN1Q05586 938 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 RAD51AP2Q09MP3 1159 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 KARSQ15046 597 aaKnown RBP22.69■■□□□ 1.22
CIRBP-209ENST00000586555 STK38Q15208 465 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 CDR2LQ86X02 465 aaPredicted RBP22.69■■□□□ 1.22
CIRBP-209ENST00000586555 DAW1Q8N136 415 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 KRI1Q8N9T8 703 aaKnown RBP22.69■■□□□ 1.22
CIRBP-209ENST00000586555 USP28Q96RU2 1077 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 TMEM175Q9BSA9 504 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 NTPCRQ9BSD7 190 aaKnown RBP22.69■■□□□ 1.22
CIRBP-209ENST00000586555 KIFC3Q9BVG8 833 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 ENTPD7Q9NQZ7 604 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 PARP2Q9UGN5 583 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 ODF2LQ9ULJ1 636 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 HCN4Q9Y3Q4 1203 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 HES2Q9Y543 173 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 TECTAO75443 2155 aa22.69■■□□□ 1.22
CIRBP-209ENST00000586555 ZMYM2Q9UBW7 1377 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 H0YCG3 227 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 PER2O15055 1255 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 POMCP01189 267 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 KRT18P05783 430 aaKnown RBP22.68■■□□□ 1.22
CIRBP-209ENST00000586555 ZSCAN22P10073 491 aaPredicted RBP22.68■■□□□ 1.22
CIRBP-209ENST00000586555 PLS3P13797 630 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 PLCG1P19174 1290 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 STRN3Q13033 797 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 MAPK7Q13164 816 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 DHX8Q14562 1220 aaKnown RBP22.68■■□□□ 1.22
CIRBP-209ENST00000586555 DCAF4L1Q3SXM0 396 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 TMEM184AQ6ZMB5 413 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 TMC7Q7Z402 723 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 GPBP1Q86WP2 473 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 SPRYD3Q8NCJ5 442 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 VN1R2Q8NFZ6 395 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 SPIRE2Q8WWL2 714 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 RAD54LQ92698 747 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 FAM122AQ96E09 287 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 GAD1Q99259 594 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 RNF39Q9H2S5 420 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 NXF3Q9H4D5 531 aaKnown RBP22.68■■□□□ 1.22
CIRBP-209ENST00000586555 PDZD7Q9H5P4 517 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 BARX2Q9UMQ3 279 aaPredicted RBP22.68■■□□□ 1.22
CIRBP-209ENST00000586555 FAN1Q9Y2M0 1017 aa22.68■■□□□ 1.22
CIRBP-209ENST00000586555 SFI1A8K8P3 1242 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 NT5C1B-RDH14C9J2C7 533 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 INPPL1O15357 1258 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 GALTP07902 379 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 DDIT3P35638 169 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 MLH1P40692 756 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 NASPP49321 788 aaPredicted RBP22.67■■□□□ 1.22
CIRBP-209ENST00000586555 ATF7IP2Q5U623 682 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 ZNF280BQ86YH2 543 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 LARP4BQ92615 738 aaKnown RBP22.67■■□□□ 1.22
CIRBP-209ENST00000586555 EPSTI1Q96J88 318 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 RPS6KC1Q96S38 1066 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 TCF25Q9BQ70 676 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 MRPL4Q9BYD3 311 aaKnown RBP22.67■■□□□ 1.22
CIRBP-209ENST00000586555 STK17AQ9UEE5 414 aa22.67■■□□□ 1.22
CIRBP-209ENST00000586555 SCP2P22307 547 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 AKAP5P24588 427 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 RBM10P98175 930 aaKnown RBP22.66■■□□□ 1.22
CIRBP-209ENST00000586555 HERC4Q5GLZ8 1057 aaPredicted RBP22.66■■□□□ 1.22
CIRBP-209ENST00000586555 SPECC1Q5M775 1068 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 RRAGBQ5VZM2 374 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 RNF135Q8IUD6 432 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 IGSF21Q96ID5 467 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 ARHGAP28Q9P2N2 729 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 DNAJB4Q9UDY4 337 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 TNFSF13BQ9Y275 285 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 ZNF318Q5VUA4 2279 aa22.66■■□□□ 1.22
CIRBP-209ENST00000586555 LOC730098B7Z3J9 87 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 SLC16A4O15374 487 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 DDHD2O94830 711 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 F13A1P00488 732 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 SLC11A1P49279 550 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 MCM6Q14566 821 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 SMC1AQ14683 1233 aaKnown RBP22.65■■□□□ 1.22
CIRBP-209ENST00000586555 CBX2Q14781 532 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-209ENST00000586555 PLPP4Q5VZY2 271 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 ATL3Q6DD88 541 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 DDX53Q86TM3 631 aaKnown RBP22.65■■□□□ 1.22
CIRBP-209ENST00000586555 TMEM87AQ8NBN3 555 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 SUSD6Q92537 303 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 CLIC6Q96NY7 704 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 BLOC1S4Q9NUP1 217 aa22.65■■□□□ 1.22
CIRBP-209ENST00000586555 USP15Q9Y4E8 981 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-209ENST00000586555 TTLL13PA6NNM8 815 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms