RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 R4GN57 208 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 GPR179Q6PRD1 2367 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
BRCA1-225ENST00000586385 WNT7AO00755 349 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 CPLX1O14810 134 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 TBX3O15119 743 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 ASAP2O43150 1006 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
BRCA1-225ENST00000586385 DCNP07585 359 aaKnown RBP13.24□□□□□ -0.29
BRCA1-225ENST00000586385 GLULP15104 373 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 GCFC2P16383 781 aaKnown RBP13.24□□□□□ -0.29
BRCA1-225ENST00000586385 AKAP5P24588 427 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 ARL2P36404 184 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 ID4P47928 161 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 SCRN1Q12765 414 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 NCAPH2Q6IBW4 605 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 FUT10Q6P4F1 479 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 NOTUMQ6P988 496 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 ERMP1Q7Z2K6 904 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 HDAC7Q8WUI4 952 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 TCP11Q8WWU5 503 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 RIN2Q8WYP3 895 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-225ENST00000586385 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 MTRQ99707 1265 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 PAAF1Q9BRP4 392 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 CXCL16Q9H2A7 254 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-225ENST00000586385 ZSWIM4Q9H7M6 989 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 ZNF292O60281 2723 aa13.24□□□□□ -0.29
BRCA1-225ENST00000586385 A0A087WWV3 80 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 CCDC194A0A1B0GVG4 234 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 POTEMA6NI47 508 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 INO80B-WBP1J3KQ70 363 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 CCNT1O60563 726 aaKnown RBP13.23□□□□□ -0.29
BRCA1-225ENST00000586385 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
BRCA1-225ENST00000586385 LRRN2O75325 713 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 ERLIN2O94905 339 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 LYPLA2O95372 231 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 CTDNEP1O95476 244 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 C1RP00736 705 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 GLRA2P23416 452 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 AXLP30530 894 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 PHLDB3Q6NSJ2 640 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 PRSS55Q6UWB4 352 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-225ENST00000586385 GET4Q7L5D6 327 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-225ENST00000586385 EXOC8Q8IYI6 725 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 MAML2Q8IZL2 1156 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-225ENST00000586385 STAMQ92783 540 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 RMDN1Q96DB5 314 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 HSD17B14Q9BPX1 270 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 TM6SF1Q9BZW5 370 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 KLK14Q9P0G3 267 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 FNIP2Q9P278 1114 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 GIT1Q9Y2X7 761 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 NUMBLQ9Y6R0 609 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 COL4A3Q01955 1670 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 OTOGLQ3ZCN5 2332 aa13.23□□□□□ -0.29
BRCA1-225ENST00000586385 ADAM12O43184 909 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 ZMYND10O75800 440 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 REC8O95072 547 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 LMNAP02545 664 aaKnown RBP13.22□□□□□ -0.29
BRCA1-225ENST00000586385 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-225ENST00000586385 NTHL1P78549 312 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 NR5A1Q13285 461 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 MXD4Q14582 209 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-225ENST00000586385 PCBP1Q15365 356 aaKnown RBP eCLIP13.22□□□□□ -0.29
BRCA1-225ENST00000586385 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 TPH2Q8IWU9 490 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 GPR65Q8IYL9 337 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 FGF14Q92915 247 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 NXPE3Q969Y0 559 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 EIF2AK1Q9BQI3 630 aaKnown RBP13.22□□□□□ -0.29
BRCA1-225ENST00000586385 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 ARHGEF3Q9NR81 526 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.297e-7■□□□□ 9.9
BRCA1-225ENST00000586385 ADAM28Q9UKQ2 775 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
BRCA1-225ENST00000586385 STK36Q9NRP7 1315 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 WDR87Q6ZQQ6 2873 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 STK25O00506 426 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 PTGESO14684 152 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 NPTXRO95502 500 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 SP9P0CG40 484 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 SPECC1Q5M775 1068 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms