RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 MAFGO15525 162 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 PLA2G6O60733 806 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 HLA-DRAP01903 254 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 TNNC2P02585 160 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 FSTL1Q12841 308 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 TERF2Q15554 542 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 SLC47A2Q86VL8 602 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 ERO1BQ86YB8 467 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 BSNDQ8WZ55 320 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 DBR1Q9UK59 544 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 MYH8P13535 1937 aa13.39□□□□□ -0.27
SMARCA4-208ENST00000585799 MYH15Q9Y2K3 1946 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 USP2O75604 605 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 MMEP08473 750 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 EPHX2P34913 555 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 GGCXP38435 758 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 CCNA1P78396 465 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 BEND6Q5SZJ8 279 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 TPCN2Q8NHX9 752 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 PBKQ96KB5 322 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 SNX24Q9Y343 169 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 FRMD3A2A2Y4 597 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 CALCOCO2Q13137 446 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 IRF2BP2Q7Z5L9 587 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 CRYGNQ8WXF5 182 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 FZD9O00144 591 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 DHX15O43143 795 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 IFNB1P01574 187 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 CTNNA1P35221 906 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 ALDH5A1P51649 535 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 EPM2AIP1Q7L775 607 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 ZNF564Q8TBZ8 553 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 SUCLA2Q9P2R7 463 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 ATP8A1Q9Y2Q0 1164 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 IGSF9BQ9UPX0 1349 aa13.38□□□□□ -0.27
SMARCA4-208ENST00000585799 GJB1P08034 283 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 EPHB4P54760 987 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 AMPD2Q01433 879 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 KRT71Q3SY84 523 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 CCNI2Q6ZMN8 369 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 CREG2Q8IUH2 290 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 ARHGEF26Q96DR7 871 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 SELENOSQ9BQE4 189 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 ADAM21Q9UKJ8 722 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 SART1O43290 800 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 MUTP22033 750 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 XRRA1Q6P2D8 792 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 UBE2Q2Q8WVN8 375 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 FAM118BQ9BPY3 351 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 TRIM51Q9BSJ1 452 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 BTBD7Q9P203 1132 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 TAF1LQ8IZX4 1826 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 ANKRD62A6NC57 917 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 LRRIQ3A6PVS8 624 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 RAD51CO43502 376 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 ATP8B1O43520 1251 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 PRKCBP05771 671 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 HNRNPH3P31942 346 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 MAPK7Q13164 816 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 TTLL4Q14679 1199 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 SLFN12LQ6IEE8 588 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 CAPN12Q6ZSI9 719 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 TMEM161BQ8NDZ6 487 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 DYDC1Q8WWB3 177 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 DAAM1Q9Y4D1 1078 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 RREB1Q92766 1687 aa13.37□□□□□ -0.27
SMARCA4-208ENST00000585799 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 DAPK3O43293 454 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 WEE2P0C1S8 567 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 ORC1Q13415 861 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 FAM47CQ5HY64 1035 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 RNPC3Q96LT9 517 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 KLHL11Q9NVR0 708 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 SCN9AQ15858 1988 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 UBE4BO95155 1302 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 TTI1O43156 1089 aa13.36□□□□□ -0.27
SMARCA4-208ENST00000585799 ATP2C2O75185 946 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms