RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 BTG3Q14201 252 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 MAPK6Q16659 721 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 ZNF720Q7Z2F6 126 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 FIBCD1Q8N539 461 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 KCNN1Q92952 543 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 FGFBP2Q9BYJ0 223 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 CCDC113Q9H0I3 377 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 CERS4Q9HA82 394 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 FAM105AQ9NUU6 356 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 ARHGAP28Q9P2N2 729 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 RWDD3Q9Y3V2 267 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 NLRC5Q86WI3 1866 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 K7ENM7 598 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 ATF7P17544 494 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 ARF4P18085 180 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 CASP5P51878 434 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 STK4Q13043 487 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 CCDC85BQ15834 202 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 ISM2Q6H9L7 571 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 HAUS6Q7Z4H7 955 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 TRIML1Q8N9V2 468 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 KIAA0895Q8NCT3 520 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 TMEM161BQ8NDZ6 487 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 PPM1EQ8WY54 764 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 CLP1Q92989 425 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 STRA6Q9BX79 667 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 SLC39A2Q9NP94 309 aa17.53■□□□□ 0.4
CSNK1D-223ENST00000584472 A0A1B0GUA9 196 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 C5orf67F2Z3F1 127 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 H0YCG3 227 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 RFXAPO00287 272 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 BIN1O00499 593 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 ACKR2O00590 384 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 PPP1R37O75864 691 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 GCNT3O95395 438 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 PRKCBP05771 671 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 IBSPP21815 317 aaPredicted RBP17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 SCP2P22307 547 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 MORC3Q14149 939 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 UBXN11Q5T124 520 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 GLIS3Q8NEA6 775 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 TMEM134Q9H6X4 195 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 PRDM6Q9NQX0 595 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 GDAQ9Y2T3 454 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 PCDHB2Q9Y5E7 798 aa17.52■□□□□ 0.4
CSNK1D-223ENST00000584472 BDP1A6H8Y1 2624 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 B4GALT5O43286 388 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 LETM1O95202 739 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 RB1P06400 928 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 LINC00271P0C7V0 271 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 MYBP10242 640 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 FGFR1P11362 822 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 BMP6P22004 513 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 ABCD1P33897 745 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 GTF2BQ00403 316 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 PRPF4BQ13523 1007 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 ALCAMQ13740 583 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 PTPROQ16827 1216 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 ZC2HC1CQ53FD0 456 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 SLC27A1Q6PCB7 646 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 EPM2AIP1Q7L775 607 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 MRPL10Q7Z7H8 261 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 ABI1Q8IZP0 508 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 RNF169Q8NCN4 708 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 FBXO22Q8NEZ5 403 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 CPB2Q96IY4 423 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 RNF19AQ9NV58 838 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 PCDHB13Q9Y5F0 798 aa17.51■□□□□ 0.39
CSNK1D-223ENST00000584472 KIAA1671Q9BY89 1806 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 TBKBP1A7MCY6 615 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 H3BNC9 293 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 K7ERI5 159 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 EIF3DO15371 548 aaKnown RBP eCLIP17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 GATMP50440 423 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 EPC2Q52LR7 807 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 CLLU1OSQ5K130 101 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 STXBP4Q6ZWJ1 553 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 TAS1R3Q7RTX0 852 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 SPRED2Q7Z698 418 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 TMEM192Q8IY95 271 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 ZNF507Q8TCN5 953 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 GDPD5Q8WTR4 605 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 SCFD1Q8WVM8 642 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 HLA-CQ95604 372 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 HVCN1Q96D96 273 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 MRPL38Q96DV4 380 aaKnown RBP17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 C17orf80Q9BSJ5 609 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 PLVAPQ9BX97 442 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 MTUS1Q9ULD2 1270 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 TBX20Q9UMR3 447 aa17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 MRPL42Q9Y6G3 142 aaKnown RBP17.5■□□□□ 0.39
CSNK1D-223ENST00000584472 N4BP3O15049 544 aa17.49■□□□□ 0.39
CSNK1D-223ENST00000584472 PRPF6O94906 941 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms