RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ARFGEF1	Q9Y6D6	1849 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	GRXCR2	A6NFK2	248 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SPATA31C1	P0DKV0	1188 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	NR1D1	P20393	614 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ABCB4	P21439	1286 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	NR2F2	P24468	414 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	LSP1	P33241	339 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ZNF76	P36508	570 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SLC12A3	P55017	1021 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	CTTN	Q14247	550 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	RBBP5	Q15291	538 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	FAM83A	Q86UY5	434 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SH3TC2	Q8TF17	1288 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	LENG9	Q96B70	501 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SH3GL2	Q99962	352 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	PTPRH	Q9HD43	1115 aa		12.48	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SGTA	O43765	313 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	CDK17	Q00537	523 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	POU5F1B	Q06416	359 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SPP2	Q13103	211 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	MPP3	Q13368	585 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	COG2	Q14746	738 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ASIC2	Q16515	512 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ODR4	Q5SWX8	454 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	EMB	Q6PCB8	327 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	BEGAIN	Q9BUH8	593 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	BHMT2	Q9H2M3	363 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	AASDHPPT	Q9NRN7	309 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SEPT11	Q9NVA2	429 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	GGA3	Q9NZ52	723 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	TMX2	Q9Y320	296 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	PCDHB13	Q9Y5F0	798 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SERPING1	P05155	500 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	CLCN2	P51788	898 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	KRT72	Q14CN4	511 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	C14orf80	Q86SX3	495 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	TRIM59	Q8IWR1	403 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	IQCK	Q8N0W5	287 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	GMCL1P1	Q8NEA9	526 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ETNPPL	Q8TBG4	499 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ZNF483	Q8TF39	744 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	GMCL1	Q96IK5	515 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	WRNIP1	Q96S55	665 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	AVEN	Q9NQS1	362 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	PKD2L1	Q9P0L9	805 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	UST	Q9Y2C2	406 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	NR2E1	Q9Y466	385 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	FZD9	O00144	591 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	DAPK3	O43293	454 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	HNRNPH1	P31943	449 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	NFX1	Q12986	1120 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	MTMR2	Q13614	643 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	GIT2	Q14161	759 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	PLS1	Q14651	629 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	TAF1C	Q15572	869 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	MAPRE1	Q15691	268 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	NAB2	Q15742	525 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063		Q3C1V9	767 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	RDH13	Q8NBN7	331 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	LILRB1	Q8NHL6	650 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SH2D3A	Q9BRG2	576 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	RNF181	Q9P0P0	153 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	CEP72	Q9P209	647 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ATP8A1	Q9Y2Q0	1164 aa		12.47	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	MYH4	Q9Y623	1939 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	MSH4	O15457	936 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	AKAP3	O75969	853 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	BPIFB3	P59826	476 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	PAK2	Q13177	524 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ZNF211	Q13398	564 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	RPS6KA1	Q15418	735 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SLC18A3	Q16572	532 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SPRED3	Q2MJR0	410 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	TMEM151B	Q8IW70	566 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	SLC7A5P1	Q8MH63	180 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	MDM1	Q8TC05	714 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	TRIM51	Q9BSJ1	452 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	VCPKMT	Q9H867	229 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	ZNF304	Q9HCX3	659 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	OSGEP	Q9NPF4	335 aa		12.46	□□□□□ -0.41
CDK5RAP3-231	ENST00000584063	FLOT1	O75955	427 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	KIAA0754	O94854	1291 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	NMT1	P30419	496 aa	Known RBP	12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	MEI1	Q5TIA1	1274 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	AADACL2	Q6P093	401 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	HOOK3	Q86VS8	718 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	MIEF2	Q96C03	454 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	INPP4A	Q96PE3	977 aa	Predicted RBP	12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	TRPV5	Q9NQA5	729 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	POLG2	Q9UHN1	485 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	FBXL5	Q9UKA1	691 aa		12.46	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	TTI1	O43156	1089 aa		12.45	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	LRRN2	O75325	713 aa		12.45	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	GFPT2	O94808	682 aa		12.45	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	LCA5L	O95447	670 aa		12.45	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	CTNNA1	P35221	906 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	HSD17B3	P37058	310 aa		12.45	□□□□□ -0.42
CDK5RAP3-231	ENST00000584063	CBLB	Q13191	982 aa		12.45	□□□□□ -0.42

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