RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ZSWIM4Q9H7M6 989 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 MRPL17Q9NRX2 175 aaKnown RBP17.38■□□□□ 0.37
SKA2-209ENST00000583976 MIOSQ9NXC5 875 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 USTQ9Y2C2 406 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 PPME1Q9Y570 386 aa17.38■□□□□ 0.37
SKA2-209ENST00000583976 DOCK8Q8NF50 2099 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 TEX28O15482 410 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 GAS2O43903 313 aaKnown RBP17.37■□□□□ 0.37
SKA2-209ENST00000583976 N4BP1O75113 896 aaKnown RBP17.37■□□□□ 0.37
SKA2-209ENST00000583976 SLITRK3O94933 977 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 MCM7P33993 719 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 DSC1Q08554 894 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 NBR1Q14596 966 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 ZNF174Q15697 407 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 RNF168Q8IYW5 571 aaPredicted RBP17.37■□□□□ 0.37
SKA2-209ENST00000583976 RABGGTAQ92696 567 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 RPS6KC1Q96S38 1066 aa17.37■□□□□ 0.37
SKA2-209ENST00000583976 NAP1L4Q99733 375 aaKnown RBP17.37■□□□□ 0.37
SKA2-209ENST00000583976 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
SKA2-209ENST00000583976 CARNS1A5YM72 827 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 POTEMA6NI47 508 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 INPPL1O15357 1258 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 STX6O43752 255 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 NARSO43776 548 aaKnown RBP17.36■□□□□ 0.37
SKA2-209ENST00000583976 RFPL2O75678 378 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 EFEMP2O95967 443 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 ARF4P18085 180 aaPredicted RBP17.36■□□□□ 0.37
SKA2-209ENST00000583976 GLRA2P23416 452 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 GLUD2P49448 558 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 FOXD4L5Q5VV16 416 aaPredicted RBP17.36■□□□□ 0.37
SKA2-209ENST00000583976 NOTUMQ6P988 496 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 OTUD6AQ7L8S5 288 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 FOXD4L4Q8WXT5 416 aaPredicted RBP17.36■□□□□ 0.37
SKA2-209ENST00000583976 CSRNP2Q9H175 543 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 GPRC5CQ9NQ84 441 aa17.36■□□□□ 0.37
SKA2-209ENST00000583976 USO1O60763 962 aaKnown RBP17.35■□□□□ 0.37
SKA2-209ENST00000583976 ALDH2P05091 517 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 AKAP5P24588 427 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 RARRES1P49788 294 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 CALCRLQ16602 461 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 GLYCTKQ8IVS8 523 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 SLFN12Q8IYM2 578 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 FLCNQ8NFG4 579 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 PIGOQ8TEQ8 1089 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 POLR3FQ9H1D9 316 aaPredicted RBP17.35■□□□□ 0.37
SKA2-209ENST00000583976 MFSD1Q9H3U5 465 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 KLK14Q9P0G3 267 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 KANSL3Q9P2N6 904 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 MTMR6Q9Y217 621 aa17.35■□□□□ 0.37
SKA2-209ENST00000583976 NEMFO60524 1076 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 CLUHO75153 1309 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 NPTXRO95502 500 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 GLUD1P00367 558 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 ADH1AP07327 375 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 SPATA31D3P0C874 917 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 ARL2P36404 184 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 TOB1P50616 345 aaPredicted RBP17.34■□□□□ 0.37
SKA2-209ENST00000583976 ASTLQ6HA08 431 aaPredicted RBP17.34■□□□□ 0.37
SKA2-209ENST00000583976 SPATA31D4Q6ZUB0 917 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 MAEAQ7L5Y9 396 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 OTOP3Q7RTS5 596 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 ASCL5Q7RTU5 278 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 IFNLR1Q8IU57 520 aaPredicted RBP17.34■□□□□ 0.37
SKA2-209ENST00000583976 EXOC8Q8IYI6 725 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 GSTCDQ8NEC7 633 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 RSAD2Q8WXG1 361 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 ACSF2Q96CM8 615 aaPredicted RBP17.34■□□□□ 0.37
SKA2-209ENST00000583976 CCDC51Q96ER9 411 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 HSD17B14Q9BPX1 270 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 TMEM60Q9H2L4 133 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 DUSP12Q9UNI6 340 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
SKA2-209ENST00000583976 COL4A3Q01955 1670 aa17.33■□□□□ 0.37
SKA2-209ENST00000583976 TTLL13PA6NNM8 815 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 ASAP2O43150 1006 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 LYPLA2O95372 231 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 NPR3P17342 541 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 RPL17P18621 184 aaKnown RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 TXKP42681 527 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 TRAPPC10P48553 1259 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 TFDP1Q14186 410 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 MXD4Q14582 209 aaPredicted RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 KIAA0319Q5VV43 1072 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 FUT10Q6P4F1 479 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 C15orf39Q6ZRI6 1047 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 CNNM3Q8NE01 707 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 HASPINQ8TF76 798 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 ZNF707Q96C28 371 aaPredicted RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 CCDC43Q96MW1 224 aaKnown RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 MYADMQ96S97 322 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 PAAF1Q9BRP4 392 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 GPR62Q9BZJ7 368 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 TTC12Q9H892 705 aaPredicted RBP17.33■□□□□ 0.36
SKA2-209ENST00000583976 KCNK12Q9HB15 430 aa17.33■□□□□ 0.36
SKA2-209ENST00000583976 DCHS1Q96JQ0 3298 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms