RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TSPY26PQ9H489 355 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 IL23AQ9NPF7 189 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 C1orf112Q9NSG2 853 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-207ENST00000583965 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
CDRT1-207ENST00000583965 OGTO15294 1046 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 FGFR1OPO95684 399 aaKnown RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 NR3C1P04150 777 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 ACTN1P12814 892 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 ADSSP30520 456 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 MRE11P49959 708 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 FKBP3Q00688 224 aaKnown RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 POU5F1Q01860 360 aaKnown RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 IKBKEQ14164 716 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 EEF1DP3Q658K8 133 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 ZC3H3Q8IXZ2 948 aaKnown RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 ENOX1Q8TC92 643 aaKnown RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 ZBTB45Q96K62 511 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 ADAM2Q99965 735 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 MSTO1Q9BUK6 570 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 CDT1Q9H211 546 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 KIAA1586Q9HCI6 787 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 RGS18Q9NS28 235 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 DMAC2Q9NW81 257 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 HSPBP1Q9NZL4 362 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 AGO2Q9UKV8 859 aaKnown RBP12.73□□□□□ -0.37
CDRT1-207ENST00000583965 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
CDRT1-207ENST00000583965 A0A0U1RQF3 1178 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 ABHD14A-ACY1A0A1B0GW23 586 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 TRIM49BA6NDI0 452 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 TISP43B9A030 160 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 IKBKBO14920 756 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 CETN3O15182 167 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 CLIC2O15247 247 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 MGEA5O60502 916 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 ZNF623O75123 536 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 BAIAP3O94812 1187 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 NPTXRO95502 500 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 SYN1P17600 705 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 NR2F2P24468 414 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 ZNF165P49910 485 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 PMS1P54277 932 aaKnown RBP12.72□□□□□ -0.37
CDRT1-207ENST00000583965 STX17P56962 302 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 ADAM9Q13443 819 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 UBXN11Q5T124 520 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 SPATA1Q5VX52 437 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 SLC24A5Q71RS6 500 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 ZBTB33Q86T24 672 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 GPD1LQ8N335 351 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 CSGALNACT2Q8N6G5 542 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 XXYLT1Q8NBI6 393 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 NOC3LQ8WTT2 800 aaKnown RBP12.72□□□□□ -0.37
CDRT1-207ENST00000583965 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 CEP63Q96MT8 703 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 DUSP9Q99956 384 aaKnown RBP12.72□□□□□ -0.37
CDRT1-207ENST00000583965 CBWD1Q9BRT8 395 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 MKNK1Q9BUB5 465 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 HAPLN2Q9GZV7 340 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 FAM105AQ9NUU6 356 aa12.72□□□□□ -0.37
CDRT1-207ENST00000583965 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-207ENST00000583965 SMTNL1A8MU46 457 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 C9IYK1 514 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 MAPK13O15264 365 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 EXTL3O43909 919 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 FAM189A1O60320 539 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 EXOC3O60645 756 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 GRM5P41594 1212 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 CYP2J2P51589 502 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 MYL5Q02045 173 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 PSRC1Q6PGN9 363 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 MRPL10Q7Z7H8 261 aaKnown RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 CDR2LQ86X02 465 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 LINC01599Q8WXQ3 324 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 FBXL18Q96ME1 805 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 ELAC1Q9H777 363 aaKnown RBP12.71□□□□□ -0.37
CDRT1-207ENST00000583965 GRPEL1Q9HAV7 217 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 FRMD4BQ9Y2L6 1034 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 PCDHB2Q9Y5E7 798 aa12.71□□□□□ -0.37
CDRT1-207ENST00000583965 GBF1Q92538 1859 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 ZNF233A6NK53 670 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 ENPP3O14638 875 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 SLC16A3O15427 465 aaKnown RBP12.7□□□□□ -0.38
CDRT1-207ENST00000583965 GNA14O95837 355 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 EOMESO95936 686 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 FGBP02675 491 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 CLTAP09496 248 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
CDRT1-207ENST00000583965 FAM189BP81408 668 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 LRRC55Q6ZSA7 311 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms