RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 NRP1O14786 923 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 LINC01565O15544 149 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 MBTPS2O43462 519 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 STX6O43752 255 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 B4GALT3O60512 393 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 NPTXRO95502 500 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 C1RP00736 705 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 PLA2G4BP0C869 781 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 SRGAP2BP0DMP2 458 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 HOXB8P17481 243 aaPredicted RBP10.9□□□□□ -0.66
SKA2-208ENST00000583927 SLC11A1P49279 550 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 NDUFV1P49821 464 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 PEX3P56589 373 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 GRIK3Q13003 919 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 LONRF3Q496Y0 759 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 PLPP4Q5VZY2 271 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 TMEM173Q86WV6 379 aaPredicted RBP10.9□□□□□ -0.66
SKA2-208ENST00000583927 RNF168Q8IYW5 571 aaPredicted RBP10.9□□□□□ -0.66
SKA2-208ENST00000583927 VPS52Q8N1B4 723 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 CALML4Q96GE6 196 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 CDK5RAP3Q96JB5 506 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 GAD1Q99259 594 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 RUSC1Q9BVN2 902 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 IGFLR1Q9H665 355 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 CD207Q9UJ71 328 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 TNFSF13BQ9Y275 285 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 FAN1Q9Y2M0 1017 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 HES2Q9Y543 173 aa10.9□□□□□ -0.66
SKA2-208ENST00000583927 SRPRBQ9Y5M8 271 aaKnown RBP10.9□□□□□ -0.66
SKA2-208ENST00000583927 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 HIDE1A8MVS5 230 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 NT5C1B-RDH14C9J2C7 533 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 H0YCG3 227 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 LILRB3O75022 631 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 NR1I2O75469 434 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 BRD1O95696 1058 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 POMCP01189 267 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 EDN1P05305 212 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 PLS3P13797 630 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 PROZP22891 400 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ABCD1P33897 745 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 MLH1P40692 756 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 SCNN1GP51170 649 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ZNF131P52739 623 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 SMTNP53814 917 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ARSHQ5FYA8 562 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 TAS1R3Q7RTX0 852 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ADHFE1Q8IWW8 467 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ZFP42Q96MM3 310 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 ACO2Q99798 780 aaKnown RBP10.89□□□□□ -0.67
SKA2-208ENST00000583927 PTPRHQ9HD43 1115 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 KMT5AQ9NQR1 393 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 BLOC1S4Q9NUP1 217 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 MIOSQ9NXC5 875 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 LARSQ9P2J5 1176 aaKnown RBP10.89□□□□□ -0.67
SKA2-208ENST00000583927 SSX2IPQ9Y2D8 614 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 CLIC4Q9Y696 253 aa10.89□□□□□ -0.67
SKA2-208ENST00000583927 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 PER2O15055 1255 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 CXCL14O95715 111 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 SOD2P04179 222 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 IL9P15248 144 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 AKAP5P24588 427 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 DDIT3P35638 169 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 GRIN1Q05586 938 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 ZP2Q05996 745 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 SLC39A14Q15043 492 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 XKR4Q5GH76 650 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 RBM23Q86U06 439 aaKnown RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 PPFIBP1Q86W92 1011 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 CDR2LQ86X02 465 aaPredicted RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 TMEM161BQ8NDZ6 487 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 VN1R2Q8NFZ6 395 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 BCL7CQ8WUZ0 217 aaPredicted RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 SUSD6Q92537 303 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 CASP10Q92851 521 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 NECAB3Q96P71 396 aaPredicted RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 RPS6KC1Q96S38 1066 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 POP1Q99575 1024 aaKnown RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 KIFC3Q9BVG8 833 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 VN1R3Q9BXE9 311 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 MRPL4Q9BYD3 311 aaKnown RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 GBP3Q9H0R5 595 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 MARCH5Q9NX47 278 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 FBXO2Q9UK22 296 aaPredicted RBP10.88□□□□□ -0.67
SKA2-208ENST00000583927 DOCK8Q8NF50 2099 aa10.88□□□□□ -0.67
SKA2-208ENST00000583927 ABLIM1O14639 778 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 PTGESO14684 152 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 RECQL4O94761 1208 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 THP07101 528 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 MAPTP10636 758 aaKnown RBP10.87□□□□□ -0.67
SKA2-208ENST00000583927 PLCG1P19174 1290 aa10.87□□□□□ -0.67
SKA2-208ENST00000583927 GRM5P41594 1212 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms