RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 KLHL5Q96PQ7 755 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 KCTD15Q96SI1 283 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 GCOM2Q9BZD3 368 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 LSG1Q9H089 658 aaKnown RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 SEMA4AQ9H3S1 761 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 NRDE2Q9H7Z3 1164 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 POLMQ9NP87 494 aaPredicted RBP6.01□□□□□ -1.45
VAPA-207ENST00000583879 BCCIPQ9P287 314 aaKnown RBP eCLIP6.01□□□□□ -1.45
VAPA-207ENST00000583879 IGSF9Q9P2J2 1179 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 WNT16Q9UBV4 365 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 TCEAL9Q9UHQ7 104 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 DUSP12Q9UNI6 340 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 LAMA4Q16363 1823 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 MYH6P13533 1939 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 ATG2AQ2TAZ0 1938 aa6.01□□□□□ -1.45
VAPA-207ENST00000583879 CNTNAP5Q8WYK1 1306 aa6□□□□□ -1.45
VAPA-207ENST00000583879 BAZ2BQ9UIF8 2168 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 WDR64B1ANS9 1081 aa6□□□□□ -1.45
VAPA-207ENST00000583879 ADAMTS3O15072 1205 aa6□□□□□ -1.45
VAPA-207ENST00000583879 ZBTB43O43298 467 aa6□□□□□ -1.45
VAPA-207ENST00000583879 ZNF623O75123 536 aa6□□□□□ -1.45
VAPA-207ENST00000583879 ZC3H11AO75152 810 aaKnown RBP eCLIP6□□□□□ -1.45
VAPA-207ENST00000583879 CSDE1O75534 798 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 OFD1O75665 1012 aa6□□□□□ -1.45
VAPA-207ENST00000583879 LMNAP02545 664 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 CNPP09543 421 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 KLRC2P26717 231 aa6□□□□□ -1.45
VAPA-207ENST00000583879 CIITAP33076 1130 aa6□□□□□ -1.45
VAPA-207ENST00000583879 CLCN4P51793 760 aa6□□□□□ -1.45
VAPA-207ENST00000583879 SETQ01105 290 aaPredicted RBP6□□□□□ -1.45
VAPA-207ENST00000583879 EXOSC10Q01780 885 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 SRSF11Q05519 484 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 TBC1D8BQ0IIM8 1120 aa6□□□□□ -1.45
VAPA-207ENST00000583879 DRP2Q13474 957 aa6□□□□□ -1.45
VAPA-207ENST00000583879 TARBP2Q15633 366 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 RTN1Q16799 776 aa6□□□□□ -1.45
VAPA-207ENST00000583879 PFKFB3Q16875 520 aaPredicted RBP6□□□□□ -1.45
VAPA-207ENST00000583879 LETM2Q2VYF4 491 aa6□□□□□ -1.45
VAPA-207ENST00000583879 PRR16Q569H4 304 aa6□□□□□ -1.45
VAPA-207ENST00000583879 NOMO2Q5JPE7 1267 aa6□□□□□ -1.45
VAPA-207ENST00000583879 GLB1LQ6UWU2 654 aa6□□□□□ -1.45
VAPA-207ENST00000583879 C15orf39Q6ZRI6 1047 aa6□□□□□ -1.45
VAPA-207ENST00000583879 DHX32Q7L7V1 743 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 SIX5Q8N196 739 aa6□□□□□ -1.45
VAPA-207ENST00000583879 SLC44A3Q8N4M1 653 aa6□□□□□ -1.45
VAPA-207ENST00000583879 KCNG4Q8TDN1 519 aa6□□□□□ -1.45
VAPA-207ENST00000583879 LPPQ93052 612 aa6□□□□□ -1.45
VAPA-207ENST00000583879 SCLT1Q96NL6 688 aa6□□□□□ -1.45
VAPA-207ENST00000583879 INSM2Q96T92 566 aaPredicted RBP6□□□□□ -1.45
VAPA-207ENST00000583879 EMILIN2Q9BXX0 1053 aa6□□□□□ -1.45
VAPA-207ENST00000583879 NIFKQ9BYG3 293 aaKnown RBP6□□□□□ -1.45
VAPA-207ENST00000583879 INO80BQ9C086 356 aaPredicted RBP6□□□□□ -1.45
VAPA-207ENST00000583879 ZMYND12Q9H0C1 365 aa6□□□□□ -1.45
VAPA-207ENST00000583879 SFXN1Q9H9B4 322 aa6□□□□□ -1.45
VAPA-207ENST00000583879 C6orf50Q9HD87 102 aa6□□□□□ -1.45
VAPA-207ENST00000583879 DISC1Q9NRI5 854 aa6□□□□□ -1.45
VAPA-207ENST00000583879 FAM105AQ9NUU6 356 aa6□□□□□ -1.45
VAPA-207ENST00000583879 TBC1D13Q9NVG8 400 aa6□□□□□ -1.45
VAPA-207ENST00000583879 STK39Q9UEW8 545 aa6□□□□□ -1.45
VAPA-207ENST00000583879 FBXL21Q9UKT6 434 aa6□□□□□ -1.45
VAPA-207ENST00000583879 BRPF3Q9ULD4 1205 aa6□□□□□ -1.45
VAPA-207ENST00000583879 KMT2EQ8IZD2 1858 aa6□□□□□ -1.45
VAPA-207ENST00000583879 DOCK5Q9H7D0 1870 aa6□□□□□ -1.45
VAPA-207ENST00000583879 MYO15AQ9UKN7 3530 aa6□□□□□ -1.45
VAPA-207ENST00000583879 ZFHX2Q9C0A1 2572 aaPredicted RBP5.99□□□□□ -1.45
VAPA-207ENST00000583879 PLXNA4Q9HCM2 1894 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 A0A087WZ62 844 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 IGKV6-21A0A0C4DH24 114 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 CCDC195A0A1B0GUA6 201 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 ESYT2A0FGR8 921 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 KRBA1A5PL33 1030 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 MEIS3P2A8K0S8 358 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 MSTNO14793 375 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 EDIL3O43854 480 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 DDHD2O94830 711 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 SFPQP23246 707 aaKnown RBP eCLIP5.99□□□□□ -1.45
VAPA-207ENST00000583879 GNA11P29992 359 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 CDC27P30260 824 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 SFNP31947 248 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 ADD1P35611 737 aaKnown RBP5.99□□□□□ -1.45
VAPA-207ENST00000583879 SLC11A1P49279 550 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 DNM2P50570 870 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 PRKCEQ02156 737 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 RNASELQ05823 741 aaKnown RBP5.99□□□□□ -1.45
VAPA-207ENST00000583879 NONOQ15233 471 aaKnown RBP eCLIP5.99□□□□□ -1.45
VAPA-207ENST00000583879 PTPN14Q15678 1187 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 LONRF3Q496Y0 759 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 RNF20Q5VTR2 975 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 TWF2Q6IBS0 349 aaKnown RBP5.99□□□□□ -1.45
VAPA-207ENST00000583879 CYP26C1Q6V0L0 522 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 ZNF280BQ86YH2 543 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 CMASQ8NFW8 434 aaPredicted RBP5.99□□□□□ -1.45
VAPA-207ENST00000583879 BCL7CQ8WUZ0 217 aaPredicted RBP5.99□□□□□ -1.45
VAPA-207ENST00000583879 NXPE3Q969Y0 559 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 LENG9Q96B70 501 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 RMDN1Q96DB5 314 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 PGBD4Q96DM1 585 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 CEP89Q96ST8 783 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 RIT2Q99578 217 aa5.99□□□□□ -1.45
VAPA-207ENST00000583879 FDXACB1Q9BRP7 624 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms