RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 STAMQ92783 540 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 HSD17B14Q9BPX1 270 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ADPGKQ9BRR6 497 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 COLEC11Q9BWP8 271 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 C2orf40Q9H1Z8 148 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PARP2Q9UGN5 583 aa9.65□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ZNF318Q5VUA4 2279 aa9.65□□□□□ -0.87
CDK5RAP3-229ENST00000583697 SF3B1O75533 1304 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 ARHGEF35A5YM69 484 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 WNT7AO00755 349 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 INPPL1O15357 1258 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 B4GALT5O43286 388 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PDGFBP01127 241 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 OR52Z1P0C646 297 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 AKAP5P24588 427 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 AVPR2P30518 371 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 DSC1Q08554 894 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 ORC2Q13416 577 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 AMHR2Q16671 573 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 FUT10Q6P4F1 479 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CDR2LQ86X02 465 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 RNF168Q8IYW5 571 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 FAM184AQ8NB25 1140 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 C8orf76Q96K31 380 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 MTMR9Q96QG7 549 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PIDD1Q9HB75 910 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 GPRC5CQ9NQ84 441 aa9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CLUHO75153 1309 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 A0A1B0GUA9 196 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 N4BP3O15049 544 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TEX28O15482 410 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 LIG1P18858 919 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 RFX1P22670 979 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 NAMPTP43490 491 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 NUBP1P53384 320 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 HMGN5P82970 282 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 DSG1Q02413 1049 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TCF15Q12870 199 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PRPF4BQ13523 1007 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PPP2R5AQ15172 486 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 MAPK6Q16659 721 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 USP41Q3LFD5 358 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CDCA2Q69YH5 1023 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PPP4R3CPQ6ZMV5 832 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CATSPER3Q86XQ3 398 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CMASQ8NFW8 434 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 DEPTORQ8TB45 409 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 NACC1Q96RE7 527 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TMEM60Q9H2L4 133 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 RNF39Q9H2S5 420 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 SMOC2Q9H3U7 446 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 FAM86C1Q9NVL1 165 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 KLK14Q9P0G3 267 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 ADAM28Q9UKQ2 775 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 DUSP12Q9UNI6 340 aa9.63□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CCDC195A0A1B0GUA6 201 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 CASTOR2A6NHX0 329 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 F8W810 466 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 LILRB3O75022 631 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 MED24O75448 989 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TADA2AO75478 443 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PRKCBP05771 671 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 SPATA31C1P0DKV0 1188 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 MYBP10242 640 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 RBM25P49756 843 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 ST3GAL1Q11201 340 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TUSC3Q13454 348 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TDGQ13569 410 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 HSP90AA2PQ14568 343 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TTC38Q5R3I4 469 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 GET4Q7L5D6 327 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 GLYCTKQ8IVS8 523 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 FLCNQ8NFG4 579 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 HASPINQ8TF76 798 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 SMG7Q92540 1137 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 ATOH1Q92858 354 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 IFT74Q96LB3 600 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PHOX2BQ99453 314 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 LLPHQ9BRT6 129 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 POLR3CQ9BUI4 534 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 RAB34Q9BZG1 259 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 FOXP1Q9H334 677 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 MIOSQ9NXC5 875 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 FBXL21Q9UKT6 434 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 LIMCH1Q9UPQ0 1083 aa9.62□□□□□ -0.87
CDK5RAP3-229ENST00000583697 PHLPP2Q6ZVD8 1323 aa9.61□□□□□ -0.87
CDK5RAP3-229ENST00000583697 MTCL1Q9Y4B5 1905 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-229ENST00000583697 A0A087WWV3 80 aa9.61□□□□□ -0.87
CDK5RAP3-229ENST00000583697 H0Y858 1186 aa9.61□□□□□ -0.87
CDK5RAP3-229ENST00000583697 TGM5O43548 720 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms