RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 SPATA31D4Q6ZUB0 917 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 ZNF554Q86TJ5 538 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 PROM2Q8N271 834 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 AGBL1Q96MI9 1066 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 PLVAPQ9BX97 442 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 DRC3Q9H069 523 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 EPB41L5Q9HCM4 733 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 NKX1-2Q9UD57 310 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 SLC9A1P19634 815 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 NR2F2P24468 414 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 KCNH2Q12809 1159 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 SEPT2Q15019 361 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 TRADDQ15628 312 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 GPATCH4Q5T3I0 446 aaKnown RBP16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 CYP4X1Q8N118 509 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 IKZF4Q9H2S9 585 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 HEY1Q9Y5J3 304 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 ABCB11O95342 1321 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 PJA2O43164 708 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 SERPING1P05155 500 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 GLI1P08151 1106 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 VPS41P49754 854 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 LBRQ14739 615 aaKnown RBP16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 P3H4Q92791 437 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 NMD3Q96D46 503 aaKnown RBP16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 KCTD10Q9H3F6 313 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 DBNDD1Q9H9R9 158 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 ATP6V0A2Q9Y487 856 aa16.53■□□□□ 0.24
TRAPPC8-210ENST00000582513 SSU72P8A0A1W2PR75 194 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 TOM1O60784 492 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 HLA-DOAP06340 250 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 ITGB3BPQ13352 177 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 KCTD21Q4G0X4 260 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 FOXB2Q5VYV0 432 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 SLC43A3Q8NBI5 491 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 AASDHPPTQ9NRN7 309 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.24
TRAPPC8-210ENST00000582513 RSPH10B2B2RC85 870 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 GDF11O95390 407 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 RSPH10BP0C881 870 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 GHRP10912 638 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 ATP6V1C1P21283 382 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 PDE1CQ14123 709 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 DCAF17Q5H9S7 520 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 DAAM2Q86T65 1068 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 CATSPER3Q86XQ3 398 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 UBLCP1Q8WVY7 318 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 ATP6V0A1Q93050 837 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 NUDCD1Q96RS6 583 aa16.52■□□□□ 0.23
TRAPPC8-210ENST00000582513 SFI1A8K8P3 1242 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 HOXA13P31271 388 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 CYP2W1Q8TAV3 490 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 IFT74Q96LB3 600 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 SLC7A5P2Q9GIP4 190 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 EFR3BQ9Y2G0 817 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 TLDC2A0PJX2 215 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 PRLRP16471 622 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 ARPC4P59998 168 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 MAGOHP61326 146 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 SFR1Q86XK3 245 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 COA1Q9GZY4 146 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 DHX36Q9H2U1 1008 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 KDM3AQ9Y4C1 1321 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 POLRMTO00411 1230 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 SHBGP04278 402 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 MYBP10242 640 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 CCR3P51677 355 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 USP11P51784 963 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 ADARP55265 1226 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 KCNA1Q09470 495 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 BYSLQ13895 437 aaKnown RBP16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 CNPY1Q3B7I2 92 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 CHMP6Q96FZ7 201 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 KRT12Q99456 494 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
TRAPPC8-210ENST00000582513 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 CCDC166P0CW27 439 aa16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 ARHGAP4P98171 946 aa16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 ASIC2Q16515 512 aa16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 PUS10Q3MIT2 529 aaKnown RBP16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 KLHL7Q8IXQ5 586 aa16.5■□□□□ 0.23
TRAPPC8-210ENST00000582513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms