RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NR1I2O75469 434 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 PAPLNO95428 1278 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 URODP06132 367 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 ADH1AP07327 375 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 ARF4P18085 180 aaPredicted RBP11.78□□□□□ -0.52
RFFL-209ENST00000581265 MLH1P40692 756 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 OR1G1P47890 313 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 RARRES1P49788 294 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 AK2P54819 239 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 DSG1Q02413 1049 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 TDGQ13569 410 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 CAPSQ13938 189 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 ANGPT1Q15389 498 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 CALCRLQ16602 461 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 ME3Q16798 604 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 GSTCDQ8NEC7 633 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 ASAP3Q8TDY4 903 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 CPB2Q96IY4 423 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 ZFP42Q96MM3 310 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 MTMR9Q96QG7 549 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 HERC2P3Q9BVR0 1158 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 COLEC11Q9BWP8 271 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 KCNK12Q9HB15 430 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 IGSF9Q9P2J2 1179 aa11.78□□□□□ -0.52
RFFL-209ENST00000581265 CCDC195A0A1B0GUA6 201 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 BTBD18B2RXH4 712 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 STK25O00506 426 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 RFX1P22670 979 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 GLRA2P23416 452 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 TXKP42681 527 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 GLUD2P49448 558 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 SCNN1GP51170 649 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 ELMSAN1Q6PJG2 1045 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 HACE1Q8IYU2 909 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 NECAB1Q8N987 351 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 PIGOQ8TEQ8 1089 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 TRIM6Q9C030 488 aaPredicted RBP11.77□□□□□ -0.53
RFFL-209ENST00000581265 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.53
RFFL-209ENST00000581265 MAN1C1Q9NR34 630 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 FAM186AA6NE01 2351 aa11.77□□□□□ -0.53
RFFL-209ENST00000581265 NEMFO60524 1076 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 GLUD1P00367 558 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 AKAP5P24588 427 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 ST3GAL2Q16842 350 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 USP41Q3LFD5 358 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 SLC27A1Q6PCB7 646 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 LILRA6Q6PI73 481 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
RFFL-209ENST00000581265 CCDC105Q8IYK2 499 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 DTWD2Q8NBA8 298 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 NSUN7Q8NE18 718 aaKnown RBP11.76□□□□□ -0.53
RFFL-209ENST00000581265 RTP3Q9BQQ7 232 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 GPR62Q9BZJ7 368 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 NXF3Q9H4D5 531 aaKnown RBP11.76□□□□□ -0.53
RFFL-209ENST00000581265 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.76□□□□□ -0.53
RFFL-209ENST00000581265 FNIP2Q9P278 1114 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 FBXL21Q9UKT6 434 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 DUSP12Q9UNI6 340 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
RFFL-209ENST00000581265 F8W810 466 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 WNT7AO00755 349 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 B4GALT5O43286 388 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 N4BP1O75113 896 aaKnown RBP11.75□□□□□ -0.53
RFFL-209ENST00000581265 RFPL2O75678 378 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 NPR3P17342 541 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 GRIK3Q13003 919 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 FAM187BQ17R55 369 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 FUT10Q6P4F1 479 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 STAMQ92783 540 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 NXPE3Q969Y0 559 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 ZNF707Q96C28 371 aaPredicted RBP11.75□□□□□ -0.53
RFFL-209ENST00000581265 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 PRIMPOLQ96LW4 560 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
RFFL-209ENST00000581265 APOL6Q9BWW8 343 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 POLR3FQ9H1D9 316 aaPredicted RBP11.75□□□□□ -0.53
RFFL-209ENST00000581265 FZD8Q9H461 694 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 EPS15L1Q9UBC2 864 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 WNT16Q9UBV4 365 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 ADAM28Q9UKQ2 775 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
RFFL-209ENST00000581265 DENND4AQ7Z401 1863 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 A0A087WWV3 80 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 TGM5O43548 720 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 LARGE1O95461 756 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 NPTXRO95502 500 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 SPATA31D3P0C874 917 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 AOC1P19801 751 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 TRIM29Q14134 588 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 RSPO4Q2I0M5 234 aaPredicted RBP11.74□□□□□ -0.53
RFFL-209ENST00000581265 CWF19L1Q69YN2 538 aaKnown RBP11.74□□□□□ -0.53
RFFL-209ENST00000581265 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
RFFL-209ENST00000581265 CDR2LQ86X02 465 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms