RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 SUMF1Q8NBK3 374 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 FAM20AQ96MK3 541 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
RFFL-208ENST00000581039 APOL6Q9BWW8 343 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 BCO2Q9BYV7 579 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 GPR62Q9BZJ7 368 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 TRIM6Q9C030 488 aaPredicted RBP11.07□□□□□ -0.64
RFFL-208ENST00000581039 CSRNP2Q9H175 543 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
RFFL-208ENST00000581039 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
RFFL-208ENST00000581039 SPATA6Q9NWH7 488 aaPredicted RBP11.07□□□□□ -0.64
RFFL-208ENST00000581039 GIT1Q9Y2X7 761 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 HES2Q9Y543 173 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 WDR81Q562E7 1941 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 C2orf16Q68DN1 1984 aa11.07□□□□□ -0.64
RFFL-208ENST00000581039 NCOR2Q9Y618 2525 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 KANSL1LA0AUZ9 987 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 POTEMA6NI47 508 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 INO80B-WBP1J3KQ70 363 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 LAMTOR5O43504 91 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 TSPAN1O60635 241 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 GLULP15104 373 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 RPL17P18621 184 aaKnown RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 SDHBP21912 280 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 PDIA3P30101 505 aaKnown RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 PTENP60484 403 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 TFDP1Q14186 410 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 EMC2Q15006 297 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 INF2Q27J81 1249 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 ZNF528Q3MIS6 628 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 SLC44A4Q53GD3 710 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 XKR9Q5GH70 373 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 VARS2Q5ST30 1063 aaKnown RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 GALNT17Q6IS24 598 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 FUT10Q6P4F1 479 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 POTEGQ6S5H5 508 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 PARM1Q6UWI2 310 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 GRASPQ7Z6J2 395 aaPredicted RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 C4orf19Q8IY42 314 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 MAML2Q8IZL2 1156 aaPredicted RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 GPR161Q8N6U8 529 aaKnown RBP11.06□□□□□ -0.64
RFFL-208ENST00000581039 ATRIPQ8WXE1 791 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 FGF14Q92915 247 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 KCNB2Q92953 911 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 CPB2Q96IY4 423 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 MTRQ99707 1265 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 NCDNQ9UBB6 729 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 ADAM28Q9UKQ2 775 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 FBXO4Q9UKT5 387 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 VAV3Q9UKW4 847 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 CDH7Q9ULB5 785 aa11.06□□□□□ -0.64
RFFL-208ENST00000581039 CEP250Q9BV73 2442 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 FAM170BA6NMN3 283 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 M0R2N6 131 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 CPLX1O14810 134 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 SLC37A4O43826 429 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 LRRN2O75325 713 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 CDC45O75419 566 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 DEXIO95424 95 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 HNRNPA1P09651 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
RFFL-208ENST00000581039 RPS6KB1P23443 525 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 AKAP5P24588 427 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 PSMA5P28066 241 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 EVCP57679 992 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 PRKCQQ04759 706 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 CSTF1Q05048 431 aaKnown RBP11.05□□□□□ -0.64
RFFL-208ENST00000581039 UBXN2BQ14CS0 331 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 EPHA7Q15375 998 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 LIN9Q5TKA1 542 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 MTSS1LQ765P7 747 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 KRT25Q7Z3Z0 450 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 RABGGTAQ92696 567 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 SECISBP2LQ93073 1101 aaKnown RBP11.05□□□□□ -0.64
RFFL-208ENST00000581039 LXNQ9BS40 222 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 AGXT2Q9BYV1 514 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 ZSWIM4Q9H7M6 989 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 WRAP73Q9P2S5 460 aaPredicted RBP11.05□□□□□ -0.64
RFFL-208ENST00000581039 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
RFFL-208ENST00000581039 CACNA1IQ9P0X4 2223 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 CCDC194A0A1B0GVG4 234 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 SPTLC1O15269 473 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 HSPA4P34932 840 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 PFKPQ01813 784 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 POU5F1BQ06416 359 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 GRIK3Q13003 919 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 CTTNQ14247 550 aaKnown RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 MLF2Q15773 248 aaPredicted RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 PPM1LQ5SGD2 360 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 PPP4R3AQ6IN85 833 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 PRSS55Q6UWB4 352 aaPredicted RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 CEP57Q86XR8 500 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 TPH2Q8IWU9 490 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 FAM177A1Q8N128 213 aaPredicted RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 GSTCDQ8NEC7 633 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 FGF13Q92913 245 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms