RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 COLGALT2Q8IYK4 626 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 VPS52Q8N1B4 723 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 TMEM130Q8N3G9 435 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 SYT2Q8N9I0 419 aaPredicted RBP13.87□□□□□ -0.19
CBX1-206ENST00000581003 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 CDK5RAP3Q96JB5 506 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 IFT74Q96LB3 600 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 C2orf40Q9H1Z8 148 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 GDAQ9Y2T3 454 aa13.87□□□□□ -0.19
CBX1-206ENST00000581003 TTC28Q96AY4 2481 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 MEFVO15553 781 aaPredicted RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 MBTPS2O43462 519 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 RECQL4O94761 1208 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 GUCY2CP25092 1073 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 OR1G1P47890 313 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 KRT17Q04695 432 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 KCNC3Q14003 757 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 PPP2R5AQ15172 486 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 FOXD4L6Q3SYB3 417 aaPredicted RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 GLRA4Q5JXX5 417 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 ATF7IP2Q5U623 682 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 FOXD4L3Q6VB84 417 aaPredicted RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 GPBP1Q86WP2 473 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 FAM178BQ8IXR5 827 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 REEP2Q9BRK0 252 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 TARS2Q9BW92 718 aaKnown RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 KMT5AQ9NQR1 393 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 ARHGAP28Q9P2N2 729 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
CBX1-206ENST00000581003 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
CBX1-206ENST00000581003 A0A087X0B3 334 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 ABLIM1O14639 778 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 N4BP3O15049 544 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 UBA7P41226 1012 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 OSTNP61366 133 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 DMP1Q13316 513 aaPredicted RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 SMC1AQ14683 1233 aaKnown RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 SEZ6Q53EL9 994 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 ZBTB33Q86T24 672 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 DDX53Q86TM3 631 aaKnown RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 HSCBQ8IWL3 235 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 MRPL43Q8N983 215 aaKnown RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 CHAMP1Q96JM3 812 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
CBX1-206ENST00000581003 AK8Q96MA6 479 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 DRC1Q96MC2 740 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 CDT1Q9H211 546 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 CD207Q9UJ71 328 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 GIT1Q9Y2X7 761 aa13.85□□□□□ -0.19
CBX1-206ENST00000581003 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 K7ERI5 159 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 C2CD2LO14523 706 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 CXCL14O95715 111 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 MYBP10242 640 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 EPCAMP16422 314 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
CBX1-206ENST00000581003 ZP2Q05996 745 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 NAB2Q15742 525 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 SMRP1Q8NCR6 262 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 TMEM161BQ8NDZ6 487 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 RAD54LQ92698 747 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
CBX1-206ENST00000581003 ACO2Q99798 780 aaKnown RBP13.84□□□□□ -0.19
CBX1-206ENST00000581003 HAPLN2Q9GZV7 340 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 IKZF4Q9H2S9 585 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 NGRNQ9NPE2 291 aaKnown RBP13.84□□□□□ -0.19
CBX1-206ENST00000581003 UBN1Q9NPG3 1134 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 TFIP11Q9UBB9 837 aaKnown RBP13.84□□□□□ -0.19
CBX1-206ENST00000581003 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 USP15Q9Y4E8 981 aaPredicted RBP13.84□□□□□ -0.19
CBX1-206ENST00000581003 HCFC2Q9Y5Z7 792 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 MYH15Q9Y2K3 1946 aa13.84□□□□□ -0.19
CBX1-206ENST00000581003 EFEMP2O95967 443 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 BMP15O95972 392 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 CTSAP10619 480 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 MAPTP10636 758 aaKnown RBP13.83□□□□□ -0.2
CBX1-206ENST00000581003 PLS3P13797 630 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 EFNA5P52803 228 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 SMAD4Q13485 552 aaKnown RBP13.83□□□□□ -0.2
CBX1-206ENST00000581003 SMAD2Q15796 467 aaKnown RBP13.83□□□□□ -0.2
CBX1-206ENST00000581003 ZNF568Q3ZCX4 644 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 SYCE2Q6PIF2 218 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
CBX1-206ENST00000581003 RASSF8Q8NHQ8 419 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 PPP2R3CQ969Q6 453 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 CALML4Q96GE6 196 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
CBX1-206ENST00000581003 GPR62Q9BZJ7 368 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms