RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FAM49AQ9H0Q0 323 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SRRDQ9UH36 339 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 AKT3Q9Y243 479 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SIK3Q9Y2K2 1263 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ADCY3O60266 1144 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ACTN1P12814 892 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CAPN2P17655 700 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PSMC2P35998 433 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SPA17Q15506 151 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 MTHFD1LQ6UB35 978 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 LMBR1Q8WVP7 490 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GOLGA1Q92805 767 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SLC35C1Q96A29 364 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 JAKMIP2Q96AA8 810 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 LACRTQ9GZZ8 138 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ANKZF1Q9H8Y5 726 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ARGLU1Q9NWB6 273 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 UBE4BO95155 1302 aa13.78□□□□□ -0.2
CDK5RAP3-217ENST00000580287 LRRC53A6NM62 1247 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 VGLL3A8MV65 326 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 B4GALT5O43286 388 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 GNA14O95837 355 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 F2P00734 622 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ADRB2P07550 413 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SMIM10L2AP0DMW4 78 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 SMIM10L2BP0DMW5 78 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CCDC127Q96BQ5 260 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 HAUS4Q9H6D7 363 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 CDC23Q9UJX2 597 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ZNF236Q9UL36 1845 aa13.77□□□□□ -0.2
CDK5RAP3-217ENST00000580287 ARID2Q68CP9 1835 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 A0A087WZ62 844 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 A0A1W2PQJ5 194 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KRT86O43790 486 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ACOT2P49753 483 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 LIG4P49917 911 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MARSP56192 900 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ALCAMQ13740 583 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FIGNQ5HY92 759 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ZNF484Q5JVG2 852 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 XXYLT1Q8NBI6 393 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KCNG1Q9UIX4 513 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 INO80B-WBP1J3KQ70 363 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 AKR1B10O60218 316 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SLC9A1P19634 815 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FGFR4P22455 802 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 STRN3Q13033 797 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MFSD10Q14728 455 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TDRD12Q587J7 1177 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ZBTB33Q86T24 672 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 RAET1EQ8TD07 263 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 FAM213AQ9BRX8 229 aa13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 INO80BQ9C086 356 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-217ENST00000580287 TREHO43280 583 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CPT1AP50416 773 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 WNT7BP56706 349 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PURAQ00577 322 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PPP2R5AQ15172 486 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KIZQ2M2Z5 673 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 RUFY4Q6ZNE9 571 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CCDC170Q8IYT3 715 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 KIAA0319LQ8IZA0 1049 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MYO1AQ9UBC5 1043 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 PLAGL2Q9UPG8 496 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MSCO60682 206 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 EIF4A3P38919 411 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 MRPS25P82663 173 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 ARID5AQ03989 594 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 BRDTQ58F21 947 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-217ENST00000580287 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms