RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GLUD1P00367 558 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 POMCP01189 267 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 ZNF528Q3MIS6 628 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 PARM1Q6UWI2 310 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 PALB2Q86YC2 1186 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 RNF168Q8IYW5 571 aaPredicted RBP21.59■■□□□ 1.05
LIMD2-209ENST00000580222 OXER1Q8TDS5 423 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 RSPH1Q8WYR4 309 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 B3GALT6Q96L58 329 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 DDX23Q9BUQ8 820 aaKnown RBP21.59■■□□□ 1.05
LIMD2-209ENST00000580222 HERC2P3Q9BVR0 1158 aa21.59■■□□□ 1.05
LIMD2-209ENST00000580222 PRG3Q9Y2Y8 225 aaPredicted RBP21.59■■□□□ 1.05
LIMD2-209ENST00000580222 IGKV6-21A0A0C4DH24 114 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 URODP06132 367 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 ADH1AP07327 375 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 CD72P21854 359 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 KRT25Q7Z3Z0 450 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 MRPL10Q7Z7H8 261 aaKnown RBP21.58■■□□□ 1.05
LIMD2-209ENST00000580222 ZBTB44Q8NCP5 570 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 TMEM175Q9BSA9 504 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.58■■□□□ 1.057e-7■■□□□ 13.5
LIMD2-209ENST00000580222 FBXO4Q9UKT5 387 aa21.58■■□□□ 1.05
LIMD2-209ENST00000580222 CCDC194A0A1B0GVG4 234 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 KANSL1LA0AUZ9 987 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 WDR64B1ANS9 1081 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 BTBD18B2RXH4 712 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 M0R2N6 131 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 SKIP12755 728 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 SFPQP23246 707 aaKnown RBP eCLIP21.57■■□□□ 1.04
LIMD2-209ENST00000580222 NR5A1Q13285 461 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 MTERF2Q49AM1 385 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 UBXN11Q5T124 520 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 MCTP1Q6DN14 999 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 TSSK4Q6SA08 328 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 SMG5Q9UPR3 1016 aaKnown RBP21.57■■□□□ 1.04
LIMD2-209ENST00000580222 DOCK8Q8NF50 2099 aa21.57■■□□□ 1.04
LIMD2-209ENST00000580222 SPTLC1O15269 473 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 LAMTOR5O43504 91 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 TGM5O43548 720 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 CHMP2AO43633 222 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 GAS2O43903 313 aaKnown RBP21.56■■□□□ 1.04
LIMD2-209ENST00000580222 ADRB1P08588 477 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 SYT1P21579 422 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 NTHL1P78549 312 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 LILRA6Q6PI73 481 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 CATSPER4Q7RTX7 472 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 RHPN2Q8IUC4 686 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 URGCPQ8TCY9 931 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 NELL1Q92832 810 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 PRKD2Q9BZL6 878 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 UNC45AQ9H3U1 944 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 RSAD1Q9HA92 442 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 PIDD1Q9HB75 910 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 SUCLA2Q9P2R7 463 aaPredicted RBP21.56■■□□□ 1.04
LIMD2-209ENST00000580222 TCEAL9Q9UHQ7 104 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 CDV3Q9UKY7 258 aaKnown RBP21.56■■□□□ 1.04
LIMD2-209ENST00000580222 PCDHGA2Q9Y5H1 932 aa21.56■■□□□ 1.04
LIMD2-209ENST00000580222 FAM170BA6NMN3 283 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 MSH4O15457 936 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 LILRB5O75023 590 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 SDHBP21912 280 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 HOXA11P31270 313 aaPredicted RBP21.55■■□□□ 1.04
LIMD2-209ENST00000580222 GLUD2P49448 558 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 RAB27AP51159 221 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 SETQ01105 290 aaPredicted RBP21.55■■□□□ 1.04
LIMD2-209ENST00000580222 SLC44A4Q53GD3 710 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 PIK3AP1Q6ZUJ8 805 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 GLYCTKQ8IVS8 523 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 COLGALT2Q8IYK4 626 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 ATRIPQ8WXE1 791 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 PGBD4Q96DM1 585 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 NIFKQ9BYG3 293 aaKnown RBP21.55■■□□□ 1.04
LIMD2-209ENST00000580222 EPC1Q9H2F5 836 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 FOXP1Q9H334 677 aaPredicted RBP21.55■■□□□ 1.04
LIMD2-209ENST00000580222 IFT122Q9HBG6 1241 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 MIOSQ9NXC5 875 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 STK39Q9UEW8 545 aa21.55■■□□□ 1.04
LIMD2-209ENST00000580222 PRR5-ARHGAP8B1AHC4 643 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 STX6O43752 255 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 RPL17P18621 184 aaKnown RBP21.54■■□□□ 1.04
LIMD2-209ENST00000580222 CIITAP33076 1130 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 OR1G1P47890 313 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 ARHGAP8P85298 464 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 DSG1Q02413 1049 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 LMNB2Q03252 620 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 UBXN2BQ14CS0 331 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 GPR161Q8N6U8 529 aaKnown RBP21.54■■□□□ 1.04
LIMD2-209ENST00000580222 TBCKQ8TEA7 893 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 TNFRSF25Q93038 417 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 SHDQ96IW2 340 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 NLRP4Q96MN2 994 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 FAM193BQ96PV7 902 aaPredicted RBP21.54■■□□□ 1.04
LIMD2-209ENST00000580222 BCO2Q9BYV7 579 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 RNF39Q9H2S5 420 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 MINDY3Q9H8M7 445 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 CHST7Q9NS84 486 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 AGPAT5Q9NUQ2 364 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 ZSCAN32Q9NX65 697 aa21.54■■□□□ 1.04
LIMD2-209ENST00000580222 SEPT9Q9UHD8 586 aaPredicted RBP21.54■■□□□ 1.04
LIMD2-209ENST00000580222 USP18Q9UMW8 372 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms