RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 HYIQ5T013 277 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 HECTD2Q5U5R9 776 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 PIK3R6Q5UE93 754 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 MAMDC2Q7Z304 686 aaPredicted RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 ADAT2Q7Z6V5 191 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 CATIPQ7Z7H3 387 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 DDX53Q86TM3 631 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 C11orf74Q86VG3 221 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 CRACR2BQ8N4Y2 399 aaPredicted RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 BVESQ8NE79 360 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 PHOSPHO1Q8TCT1 267 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 ATXN2LQ8WWM7 1075 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 NELL1Q92832 810 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 HSPBAP1Q96EW2 488 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 AHCYL2Q96HN2 611 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 FAXDC2Q96IV6 333 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 LRGUKQ96M69 825 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 CCDC140Q96MF4 163 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 NAP1L5Q96NT1 182 aaPredicted RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 PGAP2Q9UHJ9 254 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 ZKSCAN5Q9Y2L8 839 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 RABGAP1Q9Y3P9 1069 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 GAPVD1Q14C86 1478 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 ABHD14A-ACY1A0A1B0GW23 586 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 TCRBV16S1A1N1A0A5B0 115 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 DYTNA2CJ06 578 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 F5H423 210 aaPredicted RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 M0R2C6 588 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 PMM2O15305 246 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 CTNND1O60716 968 aaKnown RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 GAS7O60861 476 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 RNASEH2AO75792 299 aaKnown RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 FKBP9O95302 570 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 MT-CO1P00395 513 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 EPHX1P07099 455 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 RENBPP51606 427 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 GTF2A2P52657 109 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 DDX10Q13206 875 aaKnown RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 MYBPC2Q14324 1141 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 PDCD2Q16342 344 aaPredicted RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 INAVAQ3KP66 663 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 LY6G5CQ5SRR4 150 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 JAKMIP3Q5VZ66 844 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 ZCCHC8Q6NZY4 707 aaKnown RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 PGM2L1Q6PCE3 622 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 POMZP3Q6PJE2 187 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 FKBP9P1Q75LS8 142 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 RHOUQ7L0Q8 258 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 CHST15Q7LFX5 561 aaPredicted RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 SRGAP1Q7Z6B7 1085 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 ZC3H7AQ8IWR0 971 aaKnown RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 SYNE4Q8N205 404 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 FAM43AQ8N2R8 423 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 CBARPQ8N350 705 aaPredicted RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 PARD3BQ8TEW8 1205 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 SLC25A43Q8WUT9 341 aaPredicted RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 KCTD13Q8WZ19 329 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 TRIM63Q969Q1 353 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 TMEM169Q96HH4 297 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 SCLYQ96I15 445 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 HAUS7Q99871 368 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 NMRK2Q9NPI5 230 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 MYOTQ9UBF9 498 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 TESQ9UGI8 421 aaKnown RBP3.76□□□□□ -1.81
KPNB1-208ENST00000580019 POLG2Q9UHN1 485 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 FRMD4BQ9Y2L6 1034 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 KDM6BO15054 1643 aa3.76□□□□□ -1.81
KPNB1-208ENST00000580019 KIF13AQ9H1H9 1805 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 IFT140Q96RY7 1462 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 SETD1BQ9UPS6 1966 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 AQP7O14520 342 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 ANP32CO43423 234 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 EPB41L2O43491 1005 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CAPNS1P04632 268 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 RBP3P10745 1247 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 AKAP5P24588 427 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 IARSP41252 1262 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 GRIA2P42262 883 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 SESN3P58005 492 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 ERVK-21P61565 698 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 BTKQ06187 659 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 TBX2Q13207 712 aaPredicted RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 TOP3AQ13472 1001 aaPredicted RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 TOB2Q14106 344 aaPredicted RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 PDE1CQ14123 709 aaPredicted RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 PCBP2Q15366 365 aaKnown RBP eCLIP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 FBXO42Q6P3S6 717 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 NLRP10Q86W26 655 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CMTR2Q8IYT2 770 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CLASRPQ8N2M8 674 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 NXPE1Q8N323 547 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 ARHGEF39Q8N4T4 335 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 SPATA5Q8NB90 893 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 SMC1BQ8NDV3 1235 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 C1orf162Q8NEQ5 155 aaPredicted RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 TTLL11Q8NHH1 800 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 SLC35G2Q8TBE7 412 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CFHR4Q92496 578 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CCT6BQ92526 530 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms