RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 SLC22A17Q8WUG5 538 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 GTF3C6Q969F1 213 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 CLDN23Q96B33 292 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 TMX3Q96JJ7 454 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 RMDN3Q96TC7 470 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 RNPEPQ9H4A4 650 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 MLXIPQ9HAP2 919 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 ATP6V0A4Q9HBG4 840 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 TMEM161AQ9NX61 479 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 LIMCH1Q9UPQ0 1083 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 TELO2Q9Y4R8 837 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 SMCO2A6NFE2 343 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 CAPN8A6NHC0 703 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 EIF4E1BA6NMX2 242 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 TBKBP1A7MCY6 615 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 GGPS1O95749 300 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 MBD3O95983 291 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 NR3C2P08235 984 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 HOXB3P14651 431 aaPredicted RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 MSNP26038 577 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 CCND2P30279 289 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 HSD17B4P51659 736 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 NAPAP54920 295 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 GUCY1B3Q02153 619 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 CSTF1Q05048 431 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 SSRP1Q08945 709 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 NPY5RQ15761 445 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 LETM2Q2VYF4 491 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 EARS2Q5JPH6 523 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 JAKMIP3Q5VZ66 844 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 METTL7BQ6UX53 244 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 SLC24A5Q71RS6 500 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 MTSS1LQ765P7 747 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 MAML2Q8IZL2 1156 aaPredicted RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 PPP1R13LQ8WUF5 828 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 LZTS2Q9BRK4 669 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 EMILIN2Q9BXX0 1053 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 ADAM33Q9BZ11 813 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 CWH43Q9H720 699 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 PXMP2Q9NR77 195 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 RGS18Q9NS28 235 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 SEMA4GQ9NTN9 838 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 RTEL1Q9NZ71 1219 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.81□□□□□ -1.8
CDH19-204ENST00000579658 TMEM63CQ9P1W3 806 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 ORC3Q9UBD5 711 aaPredicted RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 SEC63Q9UGP8 760 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 CDY2AQ9Y6F7 541 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 IGSF9BQ9UPX0 1349 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 ATRXP46100 2492 aa3.81□□□□□ -1.8
CDH19-204ENST00000579658 MAP1BP46821 2468 aaKnown RBP3.81□□□□□ -1.8
CDH19-204ENST00000579658 USP24Q9UPU5 2620 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 NCOR2Q9Y618 2525 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 SRRM3A6NNA2 597 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 ANHXE9PGG2 379 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 TK2O00142 265 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CPLX1O14810 134 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CFHP08603 1231 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 MYCLP12524 364 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 RCAN1P53805 252 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 FAM189BP81408 668 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 MRPS9P82933 396 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 PAN2Q504Q3 1202 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 PPP1R18Q6NYC8 613 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 C1orf228Q6PIY5 440 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 C1orf216Q8TAB5 229 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 LMBR1Q8WVP7 490 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 LINC01599Q8WXQ3 324 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 MSANTD3Q96H12 275 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PDCD2LQ9BRP1 358 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 RNF26Q9BY78 433 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 PSTPIP2Q9H939 334 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CAPN10Q9HC96 672 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PARD6AQ9NPB6 346 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 BARHL2Q9NY43 387 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CA14Q9ULX7 337 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 ZKSCAN5Q9Y2L8 839 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 NEUROG3Q9Y4Z2 214 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CLUHO75153 1309 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CCDC196A0A1B0GTZ2 297 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 GCOM1H8Y6P7 765 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 WNT7AO00755 349 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 GPR182O15218 404 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PAPSS2O95340 614 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 POLR2MP0CAP2 368 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 UBA1P22314 1058 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 CCR3P51677 355 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PPFIA1Q13136 1202 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PGM5Q15124 567 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 ANKRD1Q15327 319 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 MLF2Q15773 248 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 ZBTB41Q5SVQ8 909 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 KCNT2Q6UVM3 1135 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 RAVER1Q8IY67 606 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 GPR65Q8IYL9 337 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 SLC39A11Q8N1S5 342 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PHTF2Q8N3S3 785 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 SLC44A3Q8N4M1 653 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms