RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 NOLC1Q14978 699 aaKnown RBP eCLIP17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 RAB30Q15771 203 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 KYAT1Q16773 422 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 BMT2Q1RMZ1 405 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 ABI1Q8IZP0 508 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 RSPH1Q8WYR4 309 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 APOL6Q9BWW8 343 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 PARP2Q9UGN5 583 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 MAN1B1Q9UKM7 699 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 HES2Q9Y543 173 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 STYXL1Q9Y6J8 313 aa17.02■□□□□ 0.32
SLC6A4-205ENST00000579221 PDE4DIPQ5VU43 2346 aa17.02■□□□□ 0.31
SLC6A4-205ENST00000579221 A0A0B4J269 797 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 ABLIM1O14639 778 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 FGFR1P11362 822 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 ATF7P17544 494 aaPredicted RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 GARTP22102 1010 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 GRM5P41594 1212 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 AGMOQ6ZNB7 445 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 THNSL1Q8IYQ7 743 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 POMGNT1Q8WZA1 660 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 LPPQ93052 612 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 ZNF689Q96CS4 500 aaPredicted RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 TMEM117Q9H0C3 514 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 NXF3Q9H4D5 531 aaKnown RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 RSAD1Q9HA92 442 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
SLC6A4-205ENST00000579221 TBKBP1A7MCY6 615 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 OGTO15294 1046 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 OFD1O75665 1012 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 AKAP5P24588 427 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 HOXD13P35453 343 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
SLC6A4-205ENST00000579221 ISM2Q6H9L7 571 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 SLC39A4Q6P5W5 647 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 HS2ST1Q7LGA3 356 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 CMTR2Q8IYT2 770 aaKnown RBP17■□□□□ 0.31
SLC6A4-205ENST00000579221 GUF1Q8N442 669 aaKnown RBP17■□□□□ 0.31
SLC6A4-205ENST00000579221 TRIML1Q8N9V2 468 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 ACAP3Q96P50 834 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 CASD1Q96PB1 797 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 MSTO1Q9BUK6 570 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 IKZF4Q9H2S9 585 aa17■□□□□ 0.31
SLC6A4-205ENST00000579221 AGO2Q9UKV8 859 aaKnown RBP17■□□□□ 0.31
SLC6A4-205ENST00000579221 BIN1O00499 593 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 LDHAP00338 332 aaKnown RBP16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 PPP1R2P41236 205 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 OSTNP61366 133 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 STIM1Q13586 685 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 MORC3Q14149 939 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 BTG3Q14201 252 aaPredicted RBP16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 COBLL1Q53SF7 1204 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 CLLU1OSQ5K130 101 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 FIBCD1Q8N539 461 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 GOLGA5Q8TBA6 731 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 URGCPQ8TCY9 931 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 HELQQ8TDG4 1101 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 RNF19AQ9NV58 838 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 KANSL3Q9P2N6 904 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 MAPK8IP1Q9UQF2 711 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 MICAL3Q7RTP6 2002 aa16.99■□□□□ 0.31
SLC6A4-205ENST00000579221 MEIS3P2A8K0S8 358 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 TISP43B9A030 160 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 PDXKO00764 312 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 TGFB1I1O43294 461 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 CALUO43852 315 aaPredicted RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 CLTAP09496 248 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 ADSSP30520 456 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 PBX2P40425 430 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 PRCPP42785 496 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 GATMP50440 423 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 PAN2Q504Q3 1202 aaKnown RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 SYAP1Q96A49 352 aaPredicted RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 KCTD10Q9H3F6 313 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 PCIF1Q9H4Z3 704 aa16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 TOPORSQ9NS56 1045 aaPredicted RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 TYW1Q9NV66 732 aaKnown RBP16.98■□□□□ 0.31
SLC6A4-205ENST00000579221 ARL5CA6NH57 179 aa16.97■□□□□ 0.31
SLC6A4-205ENST00000579221 CLIC2O15247 247 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms