RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 DEPTORQ8TB45 409 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 FEZF2Q8TBJ5 459 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 B3GALT6Q96L58 329 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 POLR3CQ9BUI4 534 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 HERC2P3Q9BVR0 1158 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 COLEC11Q9BWP8 271 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 C2orf40Q9H1Z8 148 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KCNH6Q9H252 994 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 POLD4Q9HCU8 107 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 MAN1C1Q9NR34 630 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SH2B1Q9NRF2 756 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CACNG4Q9UBN1 327 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
CDK5RAP3-211ENST00000578996 A0A1B0GUA9 196 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 N4BP3O15049 544 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PRKCBP05771 671 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ADH1AP07327 375 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RPA1P27694 616 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 NHLH1Q02575 133 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 DSC1Q08554 894 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GRIK3Q13003 919 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ORC2Q13416 577 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PRPF4BQ13523 1007 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 MAPK6Q16659 721 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 IER5LQ5T953 404 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 FUT10Q6P4F1 479 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CCDC149Q6ZUS6 474 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 BMP8AQ7Z5Y6 402 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 FBXL6Q8N531 539 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SNX29Q8TEQ0 813 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 HASPINQ8TF76 798 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ACSF2Q96CM8 615 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ASIC4Q96FT7 647 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PRIMPOLQ96LW4 560 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ADPGKQ9BRR6 497 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIFC3Q9BVG8 833 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SNTG2Q9NY99 539 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 LRWD1Q9UFC0 647 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SORCS3Q9UPU3 1222 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 USP20Q9Y2K6 914 aa10.18□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CASTOR2A6NHX0 329 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 INPPL1O15357 1258 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 TEX28O15482 410 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 LILRB3O75022 631 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 TADA2AO75478 443 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 BRD1O95696 1058 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GLUD1P00367 558 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PDGFBP01127 241 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CYP11B2P19099 503 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 NAMPTP43490 491 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 TRAPPC10P48553 1259 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ECM1Q16610 540 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ELMSAN1Q6PJG2 1045 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PPP4R3CPQ6ZMV5 832 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GPR149Q86SP6 731 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PALB2Q86YC2 1186 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PRSS33Q8NF86 280 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RIN2Q8WYP3 895 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 BSNDQ8WZ55 320 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 IFT74Q96LB3 600 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GPR62Q9BZJ7 368 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PDZD7Q9H5P4 517 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 DDX19AQ9NUU7 478 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ADAM28Q9UKQ2 775 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIAA1024Q9UPX6 916 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GDAQ9Y2T3 454 aa10.17□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CCDC195A0A1B0GUA6 201 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CCDC169A6NNP5 214 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RECQL4O94761 1208 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RPL17P18621 184 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 MRE11P49959 708 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 FXR2P51116 673 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 DSG1Q02413 1049 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PTGDRQ13258 359 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 HSP90AA2PQ14568 343 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PPP2R5AQ15172 486 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ZRSR1Q15695 479 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 USP41Q3LFD5 358 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIAA0319Q5VV43 1072 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 OTOP3Q7RTS5 596 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CEP57Q86XR8 500 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ZDHHC14Q8IZN3 488 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GSTCDQ8NEC7 633 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIF2CQ99661 725 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PAAF1Q9BRP4 392 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RAB34Q9BZG1 259 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 MFSD1Q9H3U5 465 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 FZD8Q9H461 694 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms